Sodalis praecaptivus: Sant_0080
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Entry
Sant_0080 CDS
T03004
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sod03032
]
Sant_0080 (gyrB)
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_0080 (gyrB)
Enzymes [BR:
sod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sant_0080 (gyrB)
DNA replication proteins [BR:
sod03032
]
Prokaryotic type
DNA Topoisomerases
Sant_0080 (gyrB)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sant_0080 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHF75197
UniProt:
W0HRN1
LinkDB
All DBs
Position
86352..88766
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIV
VMIHEDNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELMIKREGKVHQQTYHGGVPQSPLEVVGATDQTGTTVRFWPSFATFTNNT
EFQYEILAKRLRELSFLNSGVSIRLQDKRNDKEDHFHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTEKDSIGVEIALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNSYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESLMNERLVEY
LLENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIALAMDGATLHANAHAPALAGEPLENLVAEHYAVQKMIGRMERR
FPRALLNHLIYQPALTEAQLHQQEQVTSWIASLVQALNENEKHGSSYSFKVQENRERQLF
EPLLRVRTHGVDTDYLLDYDFIHGGEYRKLATLGEKLSDLIEADAYIERGERRQPVTSFE
QALEWLVKESRRGLAVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaagtactcaaaggactggacgcggtgcgt
aagcgcccgggtatgtatatcggcgataccgatgatggtaccggtctgcatcatatggta
ttcgaggttgtggacaacgctatcgacgaagcccttgccggtcactgtaaagaaatcgtg
gtcatgatccacgaggacaattcggtttccgtccaggatgatggtcgcggtattccgacc
ggcattcacgaagaagagggcgtctccgccgccgaagtcatcatgaccgtgctgcacgcg
ggtgggaagttcgacgacaactcctataaggtgtcgggcggcctgcacggcgtcggcgtg
tcggtggtgaacgctctgtcggaaaaactcgagctgatgatcaaacgcgaaggcaaagtg
catcagcagacctatcatggcggcgtgccccaatcgccgctggaagtggtgggcgcgacc
gaccagaccggcaccaccgtgcggttctggccgagctttgccactttcaccaataatacc
gaattccaatacgaaatcctggctaagcggctgcgtgagttgtctttcctcaactccggg
gtgtctatccgtttgcaggacaagcgcaacgacaaagaagatcatttccattacgaaggc
ggcattaaggctttcgtggaatatctgaacaagaacaaaacccctatccacccgaacgtg
ttctatttttccaccgaaaaagacagtatcggcgtggaaatcgcgctgcaatggaacgac
gggttccaggaaaatatttactgcttcaccaacaatattccccagcgcgatggcggtacc
catctggccggcttccgcgccgccatgacccgtacgctgaattcctatatggataaagaa
ggttacagtaagaaggccaaagtcagcgccaccggcgacgacgcccgtgaaggccttatc
gccgtcgtttcggtcaaggtgccggatcccaagttctcttcccaaaccaaggacaagctg
gtttcctcggaggtgaaatccgcggtggagtcgctgatgaacgaacggctggtagaatat
ctgctggaaaatcccaacgatgccaaaatcgtggtgggtaaaatcatcgatgccgcccgc
gcccgtgaagccgcccgtaaggcgcgcgagatgacccgccgtaagggggcgctggatctg
gccggtttgcccggtaagctggccgactgccaggagcgcgatccggcgctgtccgagctg
tacctggtggagggtgattccgccggcggttccgccaagcagggccgcaatcgcaaaaat
caggcgatattaccgctgaaagggaagattcttaacgttgaaaaagcccgctttgacaaa
atgctctcttcccaggaagtcgccacgctgataaccgccctcggctgcggcatcggccgc
gatgaatataatccggataagctgcgttatcacaatatcattatcatgaccgatgccgac
gtcgatggctcgcatatccgcaccctgttgttaaccttcttttatcgtcagatgccggaa
attattgagcgcggtcatgtatttatcgcccagccgccgctgtataaagtcaagaagggc
aagcaggagcaatatattaaagatgacgaggcgatggaccagtatcagatagcgctggcg
atggatggcgctacgctgcacgccaacgcccatgccccggcgctggccggcgagccgctg
gagaatctggtcgccgaacattatgccgtgcaaaagatgataggccgcatggagcgccgc
ttcccgcgtgcgttgcttaaccatctgatttatcaaccggcgttgaccgaagcgcagttg
catcagcaggagcaggtcacgagctggatagcgtcgctggtgcaagcgctgaacgaaaac
gaaaagcacggcagcagctatagcttcaaagtgcaggaaaatcgcgagcgtcagctgttc
gagccgctgctgcgcgtgcggacgcatggcgtcgataccgattatctgctggattacgat
tttatccacggcggtgagtatcgcaaactggcgacgctcggcgaaaagctcagcgatctt
atcgaggcggatgcctatatcgagcgcggtgaacgccgccaaccggtcaccagctttgaa
caggcgctggaatggctggtgaaagagtcgcgtcgcggcctggcggtgcagcgctataaa
gggctgggcgaaatgaaccccgaacagctgtgggaaaccaccatggacccggatagccgg
cgcatgttgcgcgtcacggtgaaagacgccatcgccgccgatcagctttttaccacgctg
atgggggatgcggtcgagccacggcgcgcgtttattgaagagaacgcgctaaaggcggcg
aatatcgatatttga
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