Sodalis praecaptivus: Sant_1098
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Entry
Sant_1098 CDS
T03004
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sod03019
]
Sant_1098 (rnc)
03009 Ribosome biogenesis [BR:
sod03009
]
Sant_1098 (rnc)
03036 Chromosome and associated proteins [BR:
sod03036
]
Sant_1098 (rnc)
Enzymes [BR:
sod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Sant_1098 (rnc)
Messenger RNA biogenesis [BR:
sod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sant_1098 (rnc)
Ribosome biogenesis [BR:
sod03009
]
Eukaryotic type
90S particles
RNase
Sant_1098 (rnc)
Prokaryotic type
rRNA processing factors
Sant_1098 (rnc)
Chromosome and associated proteins [BR:
sod03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Sant_1098 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHF76170
UniProt:
W0HVD8
LinkDB
All DBs
Position
1232447..1233127
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILINRLQKKLGYTFQQHDLLLQALTHRSANSKHNERLEFLGDSILSYVIANALYQRF
PRVDEGDMSRMRATLVRGNTLAEMAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILDWYRTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLAQPVVGNGSSRRKAEQAAAEQALKLLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcttaataaataggctccagaagaaactgggctacacttttcaacagcac
gatcttttgttacaggcgttaacgcaccgcagcgccaatagcaaacacaatgagcggctg
gaatttttgggcgattcgatattgagttatgttatcgccaatgcgctgtatcagcgtttc
ccgcgcgtcgacgaaggcgatatgagccggatgcgtgccacgctggtgcgcggcaatacg
cttgcggaaatggcgcgggagttcgagctgggcgaatgtttacgtctggggccgggagag
ctgaaaagcggcggtttccgtcgtgaatccattttggccgacacggtagaagcgttgatt
ggcggcgtgttcctggacagcgatattcaaaccgtcgaaaagctgatcctcgactggtac
cgcacacgtttggatgaaatcagccccggcgataagcaaaaagacccgaaaacccggctg
caagaataccttcagggacgccatttgccgctgcctacctatctggtggtgcaggtgcgc
ggcgaggcgcacgatcaggaatttaccatacactgccaggtcagcgggctggcgcagccg
gtggtcggcaatggctcaagccgtcgcaaagccgagcaggccgcggcggaacaagcactt
aaactgttggaacttgaatga
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