Sodalis praecaptivus: Sant_3560
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Entry
Sant_3560 CDS
T03004
Name
(GenBank) Yop type III secretion system effector
Organism
sod
Sodalis praecaptivus
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_1
TTSSLRR
Motif
Other DBs
NCBI-ProteinID:
AHF78542
UniProt:
W0I1A6
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Position
4072258..4073487
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AA seq
409 aa
AA seq
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MNSSALRPYHACYPHYTSYSFADVPVSRPPRLTVAEEASGRRQEDYHLIWETWMNNAPPG
SLEHRAIACERMKNCLANNDHELYLTEMNLSSLPSPLPPCIKLHLSDNRLEILPELPPEL
EYLDASNNQLRELPVNLPPQLTFLLVDYNQLEALPENLPDRLKILLACNNSLTALPERLP
AGMLTLKVCNNCLSALPAVLPTQLTHLAVDANRLSTLPNVLPPRLITLSANFNNLQSLPN
MLHTAIATLLISNNWLGKLDDALPKDILFLDASFNQLTRLPDTLGEKQPRLMFLNLSNNS
LTSLPACLPAGLTQIYLGHNQLTALPPCLPETLVYLQVRNNLLRTLPASLPAGLARLQAE
NNQLVSLPETLPASLTHLTLTNNQLTALPKTLLTGLAYLNVDNNPLPSC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtagtgctctacgaccttatcatgcctgttacccccattatacttcctactcg
tttgcggacgtcccggtaagccggccgccccgccttaccgtcgccgaagaagcttcggga
cggcgtcaggaagattatcatttaatctgggagacctggatgaataacgcgccgccaggc
tcgctggagcatcgcgctatcgcctgcgaaagaatgaaaaattgtttggccaacaatgac
catgagctgtatttaacagaaatgaatttgtcctcgcttccctccccgctaccgccgtgc
ataaagctacatctttccgacaatcgcttagaaatattgcccgaattgcctcctgaattg
gagtatttagacgccagcaataatcaacttagggaattacccgtgaatttgccgccacag
ttgacctttctgctggtggattataatcagttggaagcgctgcccgaaaatttgcctgat
agactgaaaatactgctggcctgcaataatagcctgacagccctaccggaaaggctgccc
gcgggcatgctaacgttaaaagtctgcaataattgcctcagcgcgctgcccgcggtgctg
cccacgcaattaacgcatttggccgtcgacgctaacagattatctacgctgccgaacgtt
ttaccgccgaggttgattaccttgagcgccaatttcaataaccttcagtcgttgccgaat
atgttgcataccgccattgccacattgctcatcagcaacaattggctggggaagcttgac
gacgcgctaccgaaagacatcctgttcctcgacgcgagtttcaaccaattaacgcgtctg
ccggacacccttggcgaaaagcaacccagactgatgtttcttaatctgagcaacaattcg
ctgacctcattgccggcttgcctgccagcgggactgacccaaatttatcttggccataat
cagcttaccgcgttgcccccttgtctgcccgagacgctggtttatctccaggtaagaaat
aatttattgcgcacgctgccggccagcctgcctgcaggtctcgcgcggttgcaggcggag
aacaatcagttggtctccctaccggagacattacccgccagtttaactcacctcactctg
accaataatcaacttaccgcattgccaaaaacgctgctgacgggcctggcgtatctcaac
gtagataataatccgctgccctcttgttag
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