Spinacia oleracea (spinach): 110801841
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Entry
110801841 CDS
T05137
Name
(RefSeq) oligoribonuclease isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110801841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110801841
03009 Ribosome biogenesis [BR:
soe03009
]
110801841
Messenger RNA biogenesis [BR:
soe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
110801841
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
RNases
110801841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2678
Motif
Other DBs
NCBI-GeneID:
110801841
NCBI-ProteinID:
XP_021862943
UniProt:
A0A9R0K9S8
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Position
3:105466662..105480573
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AA seq
245 aa
AA seq
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MDIFSNAFSVLALEDADDPSTLSSTSAVSNTGEGGNKSKSSDDKLVVDNGNNKEQKLGLT
VAEYKLPLVWIDLEMTGLNVEADRILEIACIITDGSLSKSVEGPDFVIHQSQECLEKMND
WCIDHHAASGLTKKVLQSIVSEQEAEQQVIEFVKKHVGTYTPLLAGNSVYTDFIFLKKYM
PDLASLFSHVLVDVSSVKALCVRWYPKAHRKAPAKSQKHRALDDIRESILELKYYKESIF
KSSKK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggacattttctcaaatgctttctcagtgttagcgcttgaagatgctgatgatccttcc
acattgtcttcaactagcgccgtttccaacacaggggagggtggtaacaaaagtaaaagc
tcagacgacaagctggtggtggataatggaaataacaaagaacagaagttaggtttaact
gtagcagaatacaaattaccccttgtctggattgatttagaaatgactggtttaaacgtc
gaagctgatcgaattttagagatagcttgtatcataacagatggcagtttgtctaaatcg
gtggagggcccggatttcgttatccatcaatctcaggaatgtttggagaagatgaatgac
tggtgtatagatcaccatgcagctagtgggttgacaaagaaggttcttcagagtatagtc
agtgaacaagaggctgagcagcaggttatagagtttgtcaagaaacatgttggtacatat
acacccctacttgcaggaaactcagtttatacagattttatattcctcaagaaatatatg
ccagacttggcaagcttattttctcatgtccttgtagacgttagcagtgtgaaggcctta
tgtgttcggtggtatcctaaagctcacagaaaggcacctgcaaaatcgcagaaacacagg
gctttggatgatatcagagaaagcatacttgaactcaagtactacaaagagagcatattt
aaatcatccaagaaatga
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