Sulfurisphaera ohwakuensis: D1869_07390
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Entry
D1869_07390 CDS
T06310
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
soh
Sulfurisphaera ohwakuensis
Pathway
soh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D1869_07390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soh03000
]
D1869_07390
03021 Transcription machinery [BR:
soh03021
]
D1869_07390
Transcription factors [BR:
soh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
D1869_07390
Transcription machinery [BR:
soh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
D1869_07390
RNA polymerase III system
TFIIIB
D1869_07390
RNA polymerase I system
SL1/TIF-1B
D1869_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
QGR17022
UniProt:
A0A650CGT6
LinkDB
All DBs
Position
complement(1324375..1324953)
Genome browser
AA seq
192 aa
AA seq
DB search
MPYKAVVNIENIVATVTLDQNLDLYAMERSVPNVEYDPDQFPGLIFRLEAPKVTSLIFKS
GKMVVTGAKSTDELIKAVKRIIKTLKRYGMNLTGKPKIQIQNIVASANLHVIVNLDKAAF
LLENNMYEPEQFPGLIYRMEDPRVVLLIFSSGKMVITGAKREEEVHKAVKKIFDKLVELD
CVKPFEEEELEF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ataccgtacaaggcagtagtaaatattgaaaacattgtagctacagtaacattggatcaa
aacttagacttgtatgcaatggaaagaagtgtaccaaatgtcgaatatgacccagatcaa
ttccctggtcttatatttaggctcgaagcaccaaaagttacttctctcatattcaaatca
ggtaaaatggtggttactggggctaagagtactgacgaattaattaaagcagtaaaaaga
ataataaaaaccctaaagagatatggaatgaatttaactggaaaaccaaaaatacagata
caaaatattgttgcatcagcaaatttacatgttatcgtaaatttagataaagcagcattc
ttgttagaaaataatatgtatgaacctgaacaattccctggattaatatataggatggaa
gatcctagagttgtattactcatctttagtagtggtaaaatggttattactggggctaag
agagaagaagaagtacataaagctgtaaagaaaatattcgataagttagttgaactagat
tgcgtaaaaccatttgaagaagaggagttagagttttaa
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