Shewanella oneidensis: SO_0592
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Entry
SO_0592 CDS
T00099
Symbol
orn
Name
(GenBank) 3'-5' oligoribonuclease Orn
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
son03019
]
SO_0592 (orn)
03009 Ribosome biogenesis [BR:
son03009
]
SO_0592 (orn)
Messenger RNA biogenesis [BR:
son03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SO_0592 (orn)
Ribosome biogenesis [BR:
son03009
]
Eukaryotic type
Pre-60S particles
RNases
SO_0592 (orn)
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AAN53670
UniProt:
Q8EJ78
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All DBs
Position
619424..619969
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AA seq
181 aa
AA seq
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MAADANNLIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDD
WNQKHHGESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYM
RELEDYFHYRNLDVSTVKELVKRWSPETMAGFKKQNTHQALQDIQESIAELQYYRSKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacgcaaataatctcatttggatcgatcttgaaatgactgggttagaaccc
gatgtggatagagtcattgaaattgctaccttagtaacggaccaagaactcaatattatc
ggtcagggacctgtgattgcgattcaccaatcggatgaagtattagcggctatggatgat
tggaaccaaaaacaccatggtgaatcgggactgattgagagagtccgcgccagccaagtg
aacgaagcagaggctgttgctcaaactattgctttcttagcgcaatacgtacctaagggc
gtctcaccaatgtgcggtaacagcgtgggccaagaccgtcgctttttaaaccgctacatg
cgcgagctggaggattacttccattaccgcaacctcgacgtaagcacggttaaagagtta
gtgaagcgttggagccctgaaaccatggcgggtttcaaaaagcaaaacactcaccaagct
ttgcaagatatccaagagtcgatagcagaattgcagtattaccgtagcaaagtatttaaa
atttga
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