KEGG   Shewanella oneidensis: SO_1168Help
Entry
SO_1168           CDS       T00099                                 

Gene name
mrdA
Definition
(RefSeq) penicillin-binding protein 2 MrdA
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
son  Shewanella oneidensis
Pathway
son00550  Peptidoglycan biosynthesis
son01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:son00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SO_1168 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SO_1168 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:son01011]
    SO_1168 (mrdA)
Enzymes [BR:son01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SO_1168 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:son01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   SO_1168 (mrdA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transpeptidase PBP_dimer
Motif
Other DBs
NCBI-GeneID: 1168997
NCBI-ProteinID: NP_716793
UniProt: Q8EHP9
LinkDB All DBs
Position
complement(1210703..1212559)
Genome map
AA seq 618 aa AA seqDB search
MSPKKRITMHDHAAEASLFKRRALFTFFCVVALLSMLVTNLYHLQVESYKDYATRSNDNR
IRVVPIAPSRGLIYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEISPDEREN
FTEALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGITVEAGLKRNYPYVSQLTHVLGY
VGKINTRDRAQLERNDQWKNYAATKDIGKQGIEKFYESLLHGTPGHLEEEVNNRGRTIRT
LKIVPPEPGQDIYLTLDLQLQQKAVELLQGHKGSIVAIDPRDGGILALVSSPSYDPNQFV
QGINRKDYSDLLNDKSRPLINRATQGQYAPASTVKPIIALLGLDEKAVTEHTRIWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTG
VDIFEESTGNMPSKEWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLASATAILANNGRR
FPPHLLKSIKDNTAKIDSPINELPPIELKNPRNWKIINEAMRQTAHKSRFTDASYTAAMK
TGTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFENPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPTP
NT seq 1857 nt NT seq  +upstreamnt  +downstreamnt
gtgtcgccaaaaaagcggataaccatgcacgaccacgccgcagaggcgtcactatttaag
cgccgtgcgctgttcacttttttttgtgttgtcgcccttcttagcatgttggtgaccaat
ctttatcatcttcaggttgaatcctataaagattacgcaacacgatcgaatgacaaccgt
attcgggtcgtccccatcgcccctagtcgtggcttgatttatgatagaaacggcgtgctg
ctcgccgagaaccaacccttttattccctcgatttggtgcctgagaaaattgccaatatg
tctgaaaccttggacgaattgggtaagttaattgagatcagccccgacgagcgtgaaaac
tttaccgaagcattaaagtttcaccgccgctttaagcccttaaccctaaaaaatcagctg
accgaagaacaggtcgctatttttagcgtgaaccaacatcgttttccagggatcaccgtc
gaagcgggtttaaaacgtaactatccctatgtcagtcagctcacccatgtgttgggttat
gtgggcaaaatcaacacccgagatcgcgcccaattagagcgcaacgatcagtggaaaaac
tatgccgctactaaagatattggtaagcaaggcattgaaaaattttatgaatcactcttg
cacggtacgcctggccacctagaggaagaagtgaacaaccgcggccgaactatccgcacc
cttaaaattgtgccaccagagccgggacaagatatttacctcaccctcgatttgcaattg
cagcaaaaagccgtggaattactccaagggcataaaggttctattgttgctatcgatcca
agggatggcgggattttagccttagtatccagccctagttacgatcccaatcagtttgtt
caagggattaaccgcaaagattacagtgatttactaaacgataaatcgcggccgctgatt
aaccgtgctacccaaggccaatatgcgcccgcatcaacggtcaaacccattattgcccta
ctgggactggatgaaaaagccgtaactgaacacacccgcatttgggaccctggcttttgg
caaattcccggcgttgagcgtaaataccgcgactggaaacgttggggccatggctgggta
aacgtctacagtgctatcgtagaatcctgcgatacctacttctatgaattggcttacaaa
atcggtgtcgaccctatcgctcgttttatggagcaatttggctttggccaaaataccggt
gtcgacattttcgaagagtcgacgggcaacatgccttcaaaggaatggaaacgcttaaag
tacaaccaagcttggtatattggcgacacgatttcagtcggtattggccaaggttactgg
acagcaacaccattgcaacttgccagtgcaacagccattctcgccaataatggccgtcgt
tttccgccgcatttgttaaagtcaatcaaagataatacagcgaaaattgattcgccaatt
aacgagttaccgccaattgagcttaaaaatccgcgtaactggaaaatcatcaacgaagcc
atgcgccaaaccgcccataaatcccgcttcaccgacgcaagctatacggcggcgatgaaa
accggtacggcgcaggtaattggtgtcgcagaaaacaccaaatacgatgctaacaaaatt
gccgagcatttccgcgataacgccctcgttgtcgcctatgcgccctttgaaaatccaaaa
atcgtgctggctgtggtaatggaaaacgccggttggggtggggcaaacgcaggccctgtg
gcccgcgccatgctcgatgaatatatgctcagagacacttggaaaccaacgccatga

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