Shewanella oneidensis: SO_1342
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Entry
SO_1342 CDS
T00099
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor 24 RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
son03021
]
SO_1342 (rpoE)
Transcription machinery [BR:
son03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SO_1342 (rpoE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AAN54407
UniProt:
Q8EH87
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All DBs
Position
1399199..1399777
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AA seq
192 aa
AA seq
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MSGQISDQQLVERVQRGDKNAFNLLVLKYQSKVISLISRYVRNQADVTDVAQEAFIKAYR
ALPNFRGESAFYTWLYRIAVNTAKNYLVSQGRRAPANDVDAEDAEYYEGSDALKEFASPE
RLMLSDEIKKVVFETLETLPEELRMAISLRELDGMSYEDIAIIMDCPVGTVRSRIFRARE
AIDKKLQPLLEE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacaaataagtgatcaacaattagttgagcgcgtacaacggggtgataaaaac
gcttttaacctgttagtgcttaaatatcagagtaaagtgattagcttgatttcacgctat
gtgcgtaaccaagcagatgttactgatgtagcacaggaagcgtttatcaaagcttatcga
gctttgccaaactttcgcggagaaagtgcgttttatacctggttgtaccgaatagccgtt
aatacggcaaagaattacctcgtgtctcaggggcgtagagctcctgcaaatgatgtggat
gctgaggatgccgaatattacgaaggcagtgatgcgctaaaggagtttgcctccccagag
cgactaatgttatcggacgaaatcaaaaaagtggttttcgaaactttagaaacattgcct
gaagaattacgtatggcaatttcattgcgtgaacttgatgggatgagttacgaagatatt
gccatcatcatggattgccctgtaggaacggtaagatctcgtatctttcgcgcccgtgaa
gcaatcgataaaaagctccagcctttgctggaagagtaa
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