Shewanella oneidensis: SO_1916
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Entry
SO_1916 CDS
T00099
Name
(GenBank) DMSO-responsive transcriptional activator of efflux pump LysR family
Organism
son
Shewanella oneidensis
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
AAN54967
UniProt:
Q8EFQ3
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Position
complement(2016446..2017327)
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AA seq
293 aa
AA seq
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MDIRQLKHLDALAITGSFTAAAKKLNMAQPALSQSIKRLELSLGVTLINRTSNKHDKHLA
LTAEGLVLHQHATLILKQIKQAEAQIRAMANLTSGEVRIAVPGMLGSFYLPSRLMAFRHQ
YPELKLSLFEGGTRDALRMLQQEEVDIAIITAQDLQPDFDSQLLIREQMVIAMGAEHPLA
ELPAVSLNDFFDHELVMFKTGYFHREWILSQAKDLGKKPNIAFETNLINLIKQIVSQGFG
ITSVLEMAISPKDDILAKPFDPPVFLNLHIAWKKQRPVSQADRAFVEFLMKNR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggatatacgccaacttaaacacttagatgcacttgctattactggcagttttaccgcc
gcggccaaaaaactcaatatggcgcaacccgcgctaagccaaagtattaaacggctcgaa
ctatcccttggcgtcaccctgatcaaccgcaccagcaataagcacgataaacacctcgca
ctcactgccgaaggcttagtgttacaccaacatgccaccttgatcctcaaacaaattaaa
caggccgaagcgcaaattcgcgcaatggcgaatttgacctcaggtgaagtacgcattgcc
gtgccgggcatgttgggttctttttacctaccttcacgactcatggcctttcgccatcaa
tatccagagttaaagctttccctctttgagggcggcacccgtgacgcgctgcgaatgttg
caacaggaagaagtggatatcgccattattaccgcccaagatctgcaacccgactttgat
agtcagctattgatccgcgagcaaatggttattgccatgggcgccgagcatccactcgca
gagcttcccgctgtgagcttaaacgacttctttgaccatgaactggtaatgttcaaaact
ggctactttcaccgcgagtggatcctctctcaggcaaaagacttgggtaaaaaacccaat
attgcctttgaaaccaatctgattaacttgatcaaacaaattgtgtcgcagggatttggt
atcacaagcgtgctcgaaatggctatcagtcctaaggatgacatcctcgcgaaacccttt
gacccaccggtatttttaaatctgcatatcgcctggaaaaagcagcgccccgtgagtcaa
gccgaccgcgcctttgtggaatttttgatgaaaaatcgataa
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