KEGG   Shewanella oneidensis: SO_3469
Entry
SO_3469           CDS       T00099                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
son  Shewanella oneidensis
Pathway
son00740  Riboflavin metabolism
son01100  Metabolic pathways
son01110  Biosynthesis of secondary metabolites
son01240  Biosynthesis of cofactors
son02024  Quorum sensing
Module
son_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:son00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SO_3469 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SO_3469 (ribD)
Enzymes [BR:son01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SO_3469 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SO_3469 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AAN56462
UniProt: Q8EBP0
LinkDB
Position
complement(3614180..3615325)
AA seq 381 aa
MNWSVLDNQMMSRAIQLARKGFYTTRPNPSVGCVIVNDNQIVGEGYHQKAGEPHAEVHAL
RMAGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLR
DAGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEA
RRDVQRLRLRSCALITGIETVLADDPSLNVRYSELGSLRAQLSESQVLQPLRVVLDSRAR
MPITAALFAIESPILLVSTVSYSSDFMVQLPAHVTCLQLPAIEGRISLSALLSYLGKSCN
QVLIEAGATLAGAFIGSGLADELVLYQAMKILGGQGRNLLELPDYQMMADIPTLKLVDER
KVGADTRFTLRLESNPSLANK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaattggtcagtactcgataaccaaatgatgagccgagctattcaattggctcgcaaa
ggattttataccactcgccccaatcccagtgtgggctgcgttatcgttaacgataaccag
attgtcggtgaaggttatcatcaaaaagccggagagccccacgctgaagtgcatgcgctg
cgcatggctggcgagcttgcccgtggcgcgactgcttatgtcaccttagaaccctgcagc
cattatggtcgtacgccgccctgcgccttggcgctgatcaatattggtgtaaagcgggtg
gtggtggcggttgaagatcctaatccgcaggtcggcgggcgcggtattcaaatgctgcgc
gatgcgggtattcaagtggatgtgggcttgcatcgtgatgaggcctatgccttaaatctt
ggttttatgaagcgcatggagtcgggtctaccttgggtgacggtaaagcttgccgcgagt
cttgatggtaaaactgcgttatcaaacggggtgtctaaatggatcactggccctgaagct
cgccgcgatgtgcagcgcttaagattacgatcctgcgcgctgatcacggggattgaaacg
gtactggccgatgatccatcgctcaatgtgcgctactcagagcttggcagtttaagagcg
caattgagtgagtcgcaggttttacagccgctgcgagtggttttggacagtcgcgcccgc
atgcctatcacggcagcattgtttgcgattgaatcacccattttattagtctcgacagtg
agctattcgtcagactttatggtgcaattacccgcccatgtgacttgcctccaattacca
gccattgagggtcgaatctccttgtctgcactattaagctatttaggcaaaagctgtaat
caggtgcttatcgaagcgggcgcgactttagctggcgcctttatcggctcaggattagcc
gatgaattagtgctttatcaagcgatgaaaatccttggcggccaaggacgtaatctactt
gaattacccgattatcaaatgatggccgatattccgaccctcaaattggtcgacgagcgt
aaagtgggcgcggatacgcgcttcaccttgaggctcgagtccaatccatctttagcgaat
aagtga

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