Shewanella oneidensis: SO_3664
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Entry
SO_3664 CDS
T00099
Symbol
fadD
Name
(GenBank) long chain fatty acid CoA ligase FadD
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
son
Shewanella oneidensis
Pathway
son00061
Fatty acid biosynthesis
son00071
Fatty acid degradation
son01100
Metabolic pathways
son01212
Fatty acid metabolism
son02024
Quorum sensing
Module
son_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SO_3664 (fadD)
00071 Fatty acid degradation
SO_3664 (fadD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SO_3664 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
son01004
]
SO_3664 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
son04147
]
SO_3664 (fadD)
Enzymes [BR:
son01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SO_3664 (fadD)
Lipid biosynthesis proteins [BR:
son01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SO_3664 (fadD)
Exosome [BR:
son04147
]
Exosomal proteins
Exosomal proteins of breast milk
SO_3664 (fadD)
Exosomal proteins of breast cancer cells
SO_3664 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AAN56649
UniProt:
Q8EB70
LinkDB
All DBs
Position
3816570..3818168
Genome browser
AA seq
532 aa
AA seq
DB search
MAYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKNSSFNEIERDSRYFAAYLQNN
TNLKPGDRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVL
SDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKNVEFCHVLQQGALLPFTRFVP
TLSDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVISEGEDIFVAPLPIYHIY
AFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALN
FSHLKITISGGTALTAAAANLWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPV
LGTEVKLLDESGNEVTQGTAGELAARGPQVMLGYWNNPQETANVMTPDGFFKTGDIAILN
EEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDDHSGEAVKAFIVL
KDDSQDHEKIKTAILNFCREQLTAYKLPKQIEFMSQLPKSTVGKILRRELKN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgatcaagagtcacaactcgaacttggcaagtactcatcactcatagactta
atcgaacgcactagccaacgctttggcgataaaacggcatatgcttgtttggggaaaaat
agcagtttcaatgagatagaacgcgactcacgttattttgctgcctatctgcaaaataac
actaacttaaaacctggtgatcgcatcgcgatccagttacccaatatcacccaatttgtc
atcgctgcctatggggcgctgcgagcgggccttatccttgtcaacaccaacccgctgtat
accgaacgtgagctcattcaccagtttaatgattcgggtgctaaggcattggtggtgtta
tcggacttactgccaacattggccaaagtcgttgcaaccacccccattgaactggttatt
tcgactcatccgttagatcttatcgacccacaagttcagcccaagacagggcttaaaaat
gttgaattctgtcatgtattacaacaaggtgcgctgttaccctttactcgctttgtacca
acattgagcgatctggcggcactgcaatatacaggtggaacaacgggactttctaagggt
gcaatgctgacccacggcaatatgcttgccaatgcggcgcaggtaaaatcccgtattggt
agcgtgatcagcgaaggcgaagacatttttgtcgcgccattgccgatttaccatatttac
gcctttatggtgaacttggtgctttattttgaatgcggtggatgctcagtactaatccct
aatccccgtgatattaatggcttaatcaaaacgctggcgaaatatcctttcaccggtttt
gcgggacttaacactctatttgtcgccctctgccatcaacccgaatttaaagcgctaaat
tttagccatttaaaaatcaccatttctggcggtactgcactcacagccgccgctgccaat
ctgtggcaacaaaccactggtaatactattagcgaaggttatggattgtcagaaacctcg
cctgtaatctctctcaatgcgccgggatatcaaaagatcggcacgattggcaaacccgtt
ctcgggactgaggtaaaactcttagatgaaagcggcaacgaagtcacccaaggcaccgct
ggtgagctcgcagcccgtggaccacaggtgatgctaggttattggaataatccacaagaa
acagccaatgtgatgacacccgatggcttttttaagactggggatattgcgattcttaac
gaggaaggcttccatcaaatcgttgatcgtaaaaaggatatgattattgtctccggcttt
aacgtatatcctaatgaagttgagaatgtgcttgctagccaccctaatatcattgaatgc
gccgtggttggcgtaaaggatgatcactcgggggaagcggttaaagcctttatcgtactg
aaggatgacagccaagatcatgagaaaataaaaactgccatcctcaacttctgccgagag
caactcacggcctataagctacctaagcagattgaatttatgtcacaactacctaagagt
accgtgggtaaaattttgcgcagagagcttaaaaactag
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