Shewanella oneidensis: SO_4122
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Entry
SO_4122 CDS
T00099
Symbol
priA
Name
(GenBank) primosomal replication protein N' PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
son
Shewanella oneidensis
Pathway
son03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SO_4122 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_4122 (priA)
Enzymes [BR:
son01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SO_4122 (priA)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SO_4122 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA-like_WH
PriA_CRR
AAA_30
TrwB_AAD_bind
zinc-ribbons_6
AAA_22
AAA_16
YopH_N
DUF5816
Flavi_glycoprot
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAN57095
UniProt:
Q8E9Y8
LinkDB
All DBs
Position
4280604..4282817
Genome browser
AA seq
737 aa
AA seq
DB search
MSLFVEVALPVPMRQNFTYRVKTNEQNDDSPQAKPQIGVRVKVPFGRQQLIGLVTAITDS
CDLAPTQLKSVIEFIDDAPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAP
QKIQYWQITTIGSNIAPETLKRAPAQKKLLEHLKQTSLTQEEVISLELNKTALKTLEEKG
WIAQHEKIAQLNLDWRSQLELDETPHRLNKEQAVAVTVLTQQQGYHCTLLEGITGSGKTE
VYLALLEHILKQGKQALILVPEIGLTPQTINRFKRRFRVNVAVLHSGLTDNQRLEAWRQA
RCGQAAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLESIPV
VLGSATPSLESLQNALSGRYHHLQLGERAGNAKKVRQGIIDIKNLPLKAGMSAPLINEIR
SHLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAI
PRQCHNCGSTMLMGQGIGTEQLAEALQLEFPKYPVVRIDRDTTRLKGSLESHLSAIHKGE
YKILVGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRANKLG
TVLLQTHQSDNPILRDLLHRGYGEFARSQLKERQMALLPPAWHMVLVRAEAHSALDADNF
LNSFASLLPQDKEFEIIGPMPAPLDRKAGKFRRQLMFQAKHRHRLQQEFERIYPLVEQLP
EAKRCRWSLDRDPQDLL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtttgttgaagttgcgttacctgtgcctatgcggcaaaactttacttatcgc
gtaaagacaaacgaacaaaacgatgatagcccccaagccaaaccacagattggcgtacgg
gtaaaagtgccctttgggcggcagcaacttattggtctcgttaccgccatcaccgacagc
tgcgatctggcgccaacacaactcaaatccgtcatagagtttattgatgacgccccctta
ttgccagaatcgctttataaattaaccctctgggccgcaagatattacttttgcagccaa
ggacaaatgctcacgcaagccttgccggtggcactgcgcaagggcttagatgccgcacca
caaaaaatccaatactggcaaatcactacaataggcagcaatattgcgccagaaacatta
aagcgcgcgcccgctcaaaaaaaattactcgagcatttaaagcaaaccagtctcacacag
gaagaagtcatcagcttagagctgaataagaccgcgctcaaaaccttagaagagaaaggc
tggattgcccagcacgaaaaaatcgcgcagctcaatctcgattggcgcagccaactcgaa
ctcgatgaaacgcctcacaggctaaataaagagcaagccgtcgccgtgacggtattaacg
cagcagcaaggataccactgtactctgctcgaaggcattaccggttcgggtaaaaccgaa
gtctatttagccttgctcgaacatattcttaagcaaggtaagcaagcacttattcttgta
cctgaaattggcctcaccccgcaaaccatcaatcgctttaagcgccgttttcgggtgaat
gttgccgtgctgcactcgggtttaaccgacaatcagcgcctcgaagcctggcgccaagcc
cgttgcggccaagctgccattattattggcactcgctccgcgttgtttacgccgatggca
tttcctggcgtcatcatcctcgacgaagaacacgacagtagctttaaacagcaagaaggt
gttggctatcacgcccgcgacttagcagtgatgcgcgggcatttagaatcgatccctgtg
gttttaggctcagcaacaccgtcattagaaagcctgcaaaatgcactcagtggccgctat
catcatctgcaactcggtgaacgggctggcaatgctaaaaaagtacgccaaggcattatc
gatattaaaaacctgccgctcaaagcgggcatgtcggcgccactgatcaatgaaatccgc
agccatttggatgccggaaatcaagtattactatttttaaaccgccgcggctttgcgcca
gcactgctctgccacgagtgtgggcacttacatgaatgcgaccgctgcgatgcatttttt
actgtgcatcaatccttaggcgagatccgttgccaccactgcggtaatcaatatgccatt
ccaaggcagtgtcacaattgcggcagtaccatgttgatgggacaaggtattggtaccgag
cagctcgccgaagcactgcaattagagtttccaaaatatccagtggtgcgtatcgatcgc
gataccactcgccttaaaggttcacttgaaagccatttaagtgcgattcataagggcgag
tataagatcctcgtcggtacccaaatgctggccaaggggcaccactttccagatgtcacc
ttagtgggattacttgatgttgatggcgcactctttagcgccgattttagggcgccagag
cgcttcggccagctttatacccaagtcgcaggccgcgcagggcgggccaataaactcggt
accgtactattgcaaactcaccagagcgataacccgatccttagggatttactccaccga
ggttatggtgagtttgcccgcagccaattaaaagaacggcaaatggcgctcttaccaccc
gcttggcatatggtactggtgcgcgccgaggcccattctgccttagatgctgacaatttt
cttaattcgtttgcatccttgctgccccaagataaagagtttgagattatcggccctatg
cccgcgccactcgatcgaaaagcaggtaagttccgccgccagttgatgtttcaggccaag
cacagacataggttgcagcaggagtttgagcgtatttatccgcttgtggaacaactgccc
gaagccaaacgctgccgctggagcttagatagggatccgcaggatctgttgtga
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