Solanum tuberosum (potato): 102578785
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Entry
102578785 CDS
T02981
Name
(RefSeq) uncharacterized LOC102578785
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102578785
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
102578785
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
zf-RanBP
DZR
Motif
Other DBs
NCBI-GeneID:
102578785
NCBI-ProteinID:
XP_006350477
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All DBs
Position
Un
AA seq
474 aa
AA seq
DB search
MVSISKFPFTLLPKIKPILVNLNPTMSWSCSRCTFLNPPSQKSSCQICLSDSPLSISSDP
SISVPKPKWPCKACTFTNPYHSISCEICGTRVSASGLATLETDDDDDLSSSVGNVFLPLR
PCNKGKITTRAPIMVEDDVKESVRFRCANAANKRKNREEPLGVEEAEVDAAMGYRGVKAA
ATKAIEISDSVEQEPGKTFSTSKSKVLKILTYNVWFADIEMHKRMKAIGSLIALHTPDVI
CFQEVTPEIYDIFQHSGWWKMYSCSISNVMELTRGYFCMQLSKLAVKSYSCKPFSNSIMG
RELCIAEIEVEKDMTLVVATSHLESPCPGPPKWDQMYSKERVEQAKEAVELLERKRNVVF
CGDMNWDDKLDGQFPPTDGWIDAWGKMKPEEIGWTYDTKSNKMLSANRTLQKRLDRIACK
LQDFCISDVKMIGKDAIPNLTYIKEKKVKSEVKRLTLPVLPSDHYGLLLEISPQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatttcaaaattccctttcactttactacccaaaatcaaaccaattcttgtc
aacctaaaccctaccatgtcttggtcatgttcacgatgcacattcttgaaccctccttcc
caaaaatcatcctgccaaatctgcttatctgactcaccattatcaatctcatcagaccct
tcaatttcagtcccaaaacccaaatggccatgtaaagcttgtacctttacgaacccttat
cacagtataagttgtgaaatatgtggtactagggtttcagcttcaggacttgctacactt
gaaactgatgatgatgatgatttgagttcttctgttggcaacgtgttcttgcctttgagg
ccttgtaacaagggtaaaataacaactagggctcctattatggttgaagatgatgtgaag
gagtctgttaggtttagatgtgcgaatgcggcaaacaagaggaaaaatagggaggaacca
ctcggggttgaagaggctgaggttgatgctgctatggggtataggggtgtaaaggctgct
gcaactaaagcaattgaaatatcggattcagtggaacaggaaccaggcaaaactttctca
accagtaaatccaaagtgttgaagatcttgacctataatgtgtggtttgcagatatagag
atgcacaagaggatgaaagccataggcagccttattgcgctgcatacgccagatgttata
tgttttcaggaggttactccagaaatatatgacatttttcagcactctggttggtggaaa
atgtattcttgttccatttcaaatgtgatggaattgacgagaggatacttctgcatgcaa
ttgagcaaacttgcagtgaaatcctacagttgcaagccatttagcaattctataatggga
agggaactctgcattgctgagattgaagttgagaaagatatgaccttggttgttgctacc
agccatcttgagagtccctgccctgggccacccaagtgggatcaaatgtacagcaaggaa
cgtgtggagcaagccaaggaagctgtggagctgcttgagagaaaacggaatgtagtcttt
tgtggtgatatgaactgggatgacaaattggatggtcaatttcctccaactgatggatgg
attgatgcttggggaaaaatgaagcctgaagaaatcggatggacatacgacaccaagtca
aacaaaatgttaagcgccaacaggacactacagaaacgtctggacaggattgcctgcaaa
ctgcaagatttctgtataagtgatgttaagatgattgggaaggatgcaattccaaatctc
acatatatcaaggagaagaaagtgaagagtgaagttaagagactgacactacctgttttg
cctagtgatcattatggtctacttttggagatctctcctcagtag
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