Solanum tuberosum (potato): 102580869
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Entry
102580869 CDS
T02981
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00100
Steroid biosynthesis
sot00909
Sesquiterpenoid and triterpenoid biosynthesis
sot01100
Metabolic pathways
sot01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102580869
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
102580869
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sot01006
]
102580869
Enzymes [BR:
sot01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102580869
Prenyltransferases [BR:
sot01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102580869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
102580869
NCBI-ProteinID:
XP_015165871
LinkDB
All DBs
Position
Un
AA seq
375 aa
AA seq
DB search
MGEIMKHPDELYPLMKLMLSAKRVEKKTSVWLLQPHWAFCYAILRKVSRSFALVIQQLPS
DLRDVVCVYYLVLRALDTVEDDTSLTTEVRVPILKDFYSHLHDPEWHFSCDTIAFKVLMD
QFHHVSTSLLELDTDYQEVIKDITKRMGEGMAKFLCKEVETINDYNEYCHYAAGLCGLGL
SKKIYASGREDLAPESLSISMGLFLQKISIIRDYLEDINEVPKCRMFWPRQIWSKYVNKL
EDFKYEENSVKAVQCLNEDCLVYMSNLRDPSIFQFCAIPLVINMGNLMMYYNNVEIFKGV
VEMRRGLCAKIIDQTRTMADVYGAFFDFCCIMESKVDRDDPNATSTLKRLEEISKNCRNS
GTLINQRFVMFPCLM
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggggagattatgaagcatccagatgaattatatccattgatgaagctcatgttatcg
gctaaacgcgtcgagaagaagacttcagtgtggctgttgcagccacactgggccttctgc
tacgctattctccgtaaggtgtctcgtagctttgctcttgtcattcaacaacttcctagc
gaccttcgtgatgtggtttgtgtttactatttggttcttagagcacttgatactgttgag
gatgataccagcttaacaactgaagttagagtacccatcttaaaagacttttatagccat
ttacatgatcctgaatggcatttttcatgtgatacaattgccttcaaagttcttatggac
caattccatcatgtttccacttctctcctagagcttgatacagattatcaggaggtgatt
aaggatattaccaagaggatgggtgaaggaatggcgaaatttctatgcaaggaggtagaa
acaatcaatgattataatgaatattgtcactatgcggctggactttgtggattaggattg
tcaaaaaaaatttatgcttctggaagagaagatttagcaccagaatccctctcgatttcc
atgggtttatttcttcagaaaataagcatcattagagattatctagaggatataaatgaa
gtacctaaatgtcgtatgttttggcctcgtcaaatttggagtaaatatgttaacaaactc
gaggactttaagtacgaggaaaactcggtcaaggcagtacagtgtctgaatgaagattgt
ctggtttacatgtctaatttacgagatccttctatctttcagttctgtgcaattccgctg
gtcataaacatggggaatttgatgatgtactacaacaacgttgaaattttcaaaggtgtt
gttgaaatgaggcgaggcctttgtgctaagattattgatcaaacgaggacaatggctgat
gtctacggagctttctttgacttttgttgtataatggaatctaaggttgatcgtgatgat
ccaaatgcaacgagtactttgaagaggctagaagaaatttcaaaaaattgcagaaactct
ggaaccttgatcaatcaaaggtttgttatgtttccttgtttgatgtag
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