Solanum tuberosum (potato): 102595970
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Entry
102595970 CDS
T02981
Name
(RefSeq) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102595970
Enzymes [BR:
sot01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
102595970
Ribosome biogenesis [BR:
sot03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
102595970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Methyltransf_31
Met_10
Methyltransf_25
Methyltransf_15
Ubie_methyltran
GCD14
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
102595970
NCBI-ProteinID:
XP_006344891
UniProt:
M1CX39
LinkDB
All DBs
Position
Un
AA seq
551 aa
AA seq
DB search
MEIWNFPACSFFSDHHTHTIMPSLLSGRILHFPKLSATSSSESYSSKQVKFPKKISQNPA
TSVRPADSGSPLRKTHKLNLEVSPHRAVSAVRLMRIEFGGAFADLLNEQGKGSGDNEMGY
VERTLGFRTRDLDDRDLRLVTEVVGGTIRWRRYLDHLILSLCHDERTFRSMEPLLVQILR
IGFYEITKLDMPPYAVVDESVRLAKVALRPGAGNLVNGILRKLAVLKESDSLPAVEVDGD
DRQQARGLATLYSHPVWMVRRWTKYFGQDTAIKLMTWNNSYPSFSLRANTGKGLTGADLV
SRLKMLKVPHEPSLYLDDFVRLKTGMQNVIQAGLLKEGFCAVQDESAGLVVSIVDPQPGE
NIIDCCAAPGGKTLFMASRLNGQGKLFAVDINEGRLRILRETAKLHQVIDVISTIHSDLR
TFSTDKVVEWDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEQLKHLQDELLDSASRLVKP
GGVLIYSTCSIDPEENEERIEAFLLRHPEFYIDPVNKYVPENFVTNRGFCMSNPVKHELD
GAFAARLVRSQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggaattttccggcgtgttccttcttctccgaccaccatacacatacaatt
atgccctcgttgctttcaggtcggatactccattttcccaagctctctgcaacttcttct
tctgaatcatattccagtaaacaagtgaaatttccaaagaaaatcagccaaaatcctgca
acttctgttcgccctgcagattctggcagtcccctaaggaaaacccacaagttgaatttg
gaagtttctcctcatagagctgtgtctgcggttagattgatgcgtatagagtttggtggt
gcatttgctgatcttctgaacgagcaagggaagggttcaggggataatgaaatgggatat
gttgaaagaactcttgggtttcgtactcgtgacttagacgacagagatttaagactggtc
acagaggttgttggaggtaccattcgctggagaagatatcttgatcacttgattctttca
ttatgccacgatgagcggacattcagaagcatggaacctcttctagtacagattcttcga
attggtttctatgagatcaccaagttagacatgccaccttatgctgttgtagatgagagt
gtaaggctcgcaaaagttgctcttagaccaggtgccggtaacttggttaatgggattctc
aggaaactagcagtccttaaggagagtgattcccttccggcagtggaagtggatggtgat
gatcgtcagcaagcacgtggtcttgcaactctttactctcatccagtttggatggtaaga
agatggacaaagtattttggacaagacacagctattaagcttatgacatggaataacagc
tatcccagttttagtctaagggcaaatactgggaaaggtttgacaggggctgatctcgtc
tcaaggcttaaaatgttgaaggtcccacatgagccttctctatacttggatgattttgta
cgtctaaaaactggaatgcagaatgttatacaggctggattactaaaagaaggcttctgt
gcagtccaggatgaaagtgccggattagtagtctctattgttgatccacaacctggtgag
aacattattgattgttgtgctgctccaggagggaaaaccttgttcatggcatcccgtttg
aatggccaaggtaaattatttgctgttgacataaatgaaggtcgattgcggatactcaga
gagacagccaagttgcaccaagttattgatgttatcagtactatccattctgatcttcga
actttttctacggataaagtcgtagaatgggataaagttttactggatgcaccttgttca
gggcttggtgttctttcaaagcgagcagatttgcgttggaataggagactggaagacatg
gagcaacttaaacatttacaggatgagcttctcgattcagcttccaggttggtgaagcca
ggtggagtgctaatatacagcacatgttccattgaccctgaagagaatgaggaaagaatt
gaagcttttctcttaaggcatccagaattttacattgatcctgtgaacaaatatgtacct
gagaattttgttactaaccgaggtttctgtatgtctaatcctgtgaagcatgaacttgat
ggagcctttgcagctcgcctggttaggtcgcaataa
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