Solanum tuberosum (potato): 102597627
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Entry
102597627 CDS
T02981
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03022
Basal transcription factors
sot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102597627
09124 Replication and repair
03420 Nucleotide excision repair
102597627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102597627
03400 DNA repair and recombination proteins [BR:
sot03400
]
102597627
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102597627
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102597627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
102597627
NCBI-ProteinID:
XP_006347058
LinkDB
All DBs
Position
Un
AA seq
453 aa
AA seq
DB search
MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA
KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEATYQLNPKFQFNLQKHIVHGGIL
PREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEGGKTTNISSSMMKIFQRGLLS
QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG
KAYNTNTITDLQRSIIKDLSDLGLVKLQQGRKESWFIPTKLATNLSISLADTTSRKQGFI
VIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAINKESLYKAFQNGITSDQIVSF
LQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMEPAHFYDEFPSKDVFEAACDFARE
YGGLLWEDSKRMRLVVKADILTEMKEFLRRQKQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagtgaagatcgtcgccaggaatttcatggacatggtggcttcattgcctgtc
atgaaactcgacatgctttacgacaattcctttatctgtgaagccattcttagatcgtta
cctcccttagcgaagaagtatgtgctgcaaatgttgtatatagacataccaattacagct
aagtcgatggaggagtgggtgcttccagatggattctcaaagcataaagttgccattgat
agattgatacagctgagagtaatgacggaaacatttgacaggaaaaaggaagccacttat
caactaaacccaaaatttcaatttaatcttcagaagcatatagtccatggtggaatctta
ccaagggaaccaatgccttctaatatcactgtgaggcttcctagcttggaggagttagag
gcatatgctgttgaacaatgggagtgctttctgctgaaccttataagctccagtgaaggt
ggaaagaccacaaacataagctcttcgatgatgaaaatcttccagcgtggacttttaagt
cagagagacgatagagaacctccaaggttgactgaaagtgggttccagttcttgctaatg
gacacaaatgcacagctttggtacatcatcagggagtacataacaaatgctgaggagcga
ggagtggattcagcagatcttattgcatttctgttggagctaagctttcatgttactggc
aaggcatacaacacaaacacaataactgatctccagcgaagtataattaaggacctttca
gatttgggattggttaagctgcagcagggaaggaaagagagttggtttattcccaccaaa
ctggcgaccaacctgtcaattagcttagcggatacaacatcaaggaaacagggttttatc
gttattgaaacaaacttcagactgtatgcatattcaacgtcaaaattgcactgtgagatc
ctacgcctttttgcaagggtggaataccagcttccaaatctcattgttggtgctattaat
aaagaaagtttgtataaagcttttcaaaacggcattacttctgaccagatagtttctttc
cttcagcagaatgcacatcctagggttgcagagaggataccatctgtgccggagaatgtt
actgatcagattagattgtgggaatctgatctgaatcgggttgagatggagccagcccac
ttctacgatgaattcccttctaaagatgtctttgaggctgcctgtgattttgccagagaa
tatggaggattactgtgggaggactctaagcgaatgcgtctcgttgttaaagctgatatt
ttgactgagatgaaggaatttcttcgtcgtcaaaagcaataa
DBGET
integrated database retrieval system
