Spathaspora passalidarum: SPAPADRAFT_57607
Help
Entry
SPAPADRAFT_57607 CDS
T03101
Name
(RefSeq) tRNA ligase
KO
K14679
tRNA ligase [EC:
6.5.1.3
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaa03016
]
SPAPADRAFT_57607
Enzymes [BR:
spaa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.3 RNA ligase (ATP)
SPAPADRAFT_57607
Transfer RNA biogenesis [BR:
spaa03016
]
Eukaryotic type
tRNA spricing factors
Other tRNA splicing factors
SPAPADRAFT_57607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_lig_T4_1
tRNA_lig_kinase
tRNA_lig_CPD
Motif
Other DBs
NCBI-GeneID:
18872136
NCBI-ProteinID:
XP_007377932
JGI:
57607
UniProt:
G3AVE7
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MESFIDSPEEVIELCNSLHQSTQLKKSGRCIKFTNTIFNTDVAVDSWKFMDWDYGKDKIK
LPIQARGLFTINDEKIAVRGYDKFFNVDEKVFTKVDELKKSTSGPYDVTLKENGCIVFIS
GLSNGDIIVCSKHSTGPRDNTTRNHALEGEKRLRLQLGEDKVKQLAKYLAEHNLTAVAEL
CDDEFEEHVLSYSKDKSGLYLHGLNYNTIQFRTVPIEKVIQFADDWNFKKVDYLTFTDVE
KLFEFLEKCSETGKYQDREVEGFVIRCKRNNADFFFKYKFEQPYLLYRQFREVTRQLIID
DIPIQSVRMKKNKFITKKYLEFVSELFAKQPQLKADFIDGHGIIKVRELFLENLHETNGM
KLLTIDESLSHELDNLSLQHEIKYVLVPVATIGCGKTTVFNTLSGLFPDWVHIQNDNIAK
RSKLKIVDLTLMSLANYDVVLFDRNNSEYRERKQIFTTVDQKRHDYLDETTQIKYIAINF
VHDVDYDQLWDITFERIKARGDNHQSIKSDSDELLATKVMKGFINRFQPLDTEREPDSGF
DHVINLTLGENTSLGNVRLIIKELAEKYPELIPEQPTEEQISSKFTEALNYKPDYTKNMT
NEKPKPVYYGVNIDHSKIIDAVNNQIGGHDSWQSLQGINRVQREFHVTLSHSANARGENK
SKWKQIVNKLGKGEDKSGKSYLEFYADVKLTQVAITPDLICLKVDLLGTFDSDFNVVESE
HLSTMLHITIGTFRPEVKPVESGIILQKLYADDSTLKPDGEYRVEGNTVTIVNFADESIL
EKQRLFVYK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgttcattgactcacctgaagaagttattgaattgtgtaatctgttacatcaa
tcaacgcaacttaagaaatctggtcgatgtatcaaattcaccaataccatattcaatacc
gacgtggctgttgattcctggaagtttatggattgggattatggtaaggataaaatcaaa
ttgccaattcaagccagagggttgtttactataaacgatgaaaaaattgctgttcgtggg
tacgataagtttttcaatgtggatgagaaagtttttacaaaagtggacgagttgaagaag
agcacgtctggtccatatgatgttaccctaaaagaaaatggatgtattgtgtttataagt
ggattaagtaatggtgatatcattgtgtgctcaaaacattcaactggaccacgtgacaac
accactcggaatcatgcattagaaggagagaaacgattacgtttgcaattgggagaagac
aaggttaaacagttggcaaagtacttggctgagcataatttgactgcagttgctgaatta
tgtgatgatgaatttgaagaacatgttttaagttatagcaaggacaaatcaggattgtac
ttgcacgggttgaattataacaccatacaattccgtacagttccaatagagaaagttatt
cagtttgccgatgactggaatttcaaaaaggtagattatttaaccttcacagatgttgaa
aaactatttgagtttttggaaaagtgcagcgaaactggaaaatatcaagatcgggaagtt
gaaggattcgtcattcgttgcaaacgtaacaatgccgactttttcttcaagtacaaattc
gaacaaccctatttattataccgtcagtttcgagaagttacccgacagctaatcattgat
gatattcctattcaatcggttcgaatgaaaaagaacaaatttataactaaaaaatatctc
gaatttgtgtcagaattatttgccaagcaacctcaattaaaggcggactttattgatgga
catggaattattaaagttcgagaattatttttagaaaatttacatgaaactaatggaatg
aaattattgaccattgacgagagtttgtcgcatgaattagacaatttgtcgttacaacat
gaaataaagtatgttttagtacctgtagcgactataggttgtggtaagaccacggtgttt
aatacccttagcgggttatttccagattgggttcatatacaaaatgacaatattgcaaaa
aggtcaaaattgaaaattgtcgatttgacgttaatgtcattagctaattatgacgtggta
ttgtttgatagaaataattctgaataccgggaaagaaaacaaattttcaccacagtcgat
caaaaacgccacgattacttagatgagactacccagatcaaatatattgccattaatttt
gttcatgatgttgattatgatcaattatgggatataacatttgaaagaattaaggctaga
ggtgataatcaccaatctataaagtctgattctgatgaactattagccacaaaagtgatg
aaggggtttattaataggtttcaaccactagacacggaaagagaacccgacagtgggttt
gatcatgtcataaatttaaccttgggcgaaaatacttcattgggaaatgttagattgata
atcaaggagttagccgagaagtaccccgaattgatcccagaacaaccaaccgaagaacaa
atatccctgaagtttactgaagctttaaattacaaaccagattataccaaaaatatgacc
aatgaaaagcccaaacctgtctactatggggtaaatatcgatcattcaaaaatcatagat
gcagtcaacaaccagatagggggtcatgatctgtggcaatcattacaaggtattaataga
gtacaacgtgaatttcatgtaactttatcccatagtgccaacgccagaggagagaataaa
tccaaatggaaacaaatcgttaacaagttaggtaaaggagaagacaaatcaggtaaatca
taccttgagttttatgctgatgtcaagttaactcaggttgcaatcactccagatttgatc
tgtttaaaagttgatttactcggtacttttgatagtgacttcaatgtagtggaactggaa
cacttgagtacaatgcttcatattaccattggtacatttagacctgaagttaagccagtt
gagtcggggattatcttgcaaaagttatatgctgatgattcaaccttgaaaccagatggt
gaataccgagtggaaggaaatactgttactattgtcaactttgcagacgagagtatctta
gaaaagcaacgattatttgtatataaatag
DBGET
integrated database retrieval system