Sphingomonas panacis: AWL63_02785
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Entry
AWL63_02785 CDS
T04760
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
span03016
]
AWL63_02785
Enzymes [BR:
span01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AWL63_02785
Transfer RNA biogenesis [BR:
span03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AWL63_02785
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOH83061
UniProt:
A0A1B3Z6K5
LinkDB
All DBs
Position
complement(604113..604733)
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AA seq
206 aa
AA seq
DB search
MTVHLHEEDLPEGVFAPGADIAVDTETMGLITPRDRLCVVQLSDGGPDEHLVRFSPGSDY
AAPNLRAVLADPARVKLYHFGRFDLAAIRHYLGVTAAPVYCTKIASRLVRTYTDRHGLKE
LVRELLSQDISKAQQSSDWGGPVLSDAQKDYAASDVRYLHALRDELDRRLAREGRTALAQ
ACFDFLPSRAELDLAGWPEIDIFAHI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcatctccacgaagaagacctgcccgaaggcgtgttcgcgccgggcgccgac
atcgccgtcgataccgagacgatgggcctcattaccccgcgcgaccgtttgtgcgtcgtc
cagctttccgacggcggacccgacgagcatctcgtccggttctcgcccggcagcgactat
gccgcgccgaacctgcgcgcggtgctcgccgatccggctcgcgtgaagctctatcatttc
ggccgcttcgatctcgccgcgatccgtcactatctcggcgtgacggcggcaccggtgtac
tgcaccaagatcgcctcgcggctcgtgcgaacctatacagaccgtcacggactcaaggag
ttggtccgggaattgctgagccaggacatctccaaggcacagcagtcctccgactggggc
ggcccggtactgagcgacgcgcaaaaggactacgccgcgtccgacgttcgctaccttcac
gctcttcgcgacgaactcgatcgccgcctcgcccgcgagggccgcaccgcgctggcgcag
gcgtgtttcgatttcctgccgtcgcgcgccgaactcgatctcgccggctggcccgagatc
gacatcttcgcgcatatctga
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