Sphingomonas panacis: AWL63_21085
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Entry
AWL63_21085 CDS
T04760
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
span03009
]
AWL63_21085
Enzymes [BR:
span01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AWL63_21085
Ribosome biogenesis [BR:
span03009
]
Prokaryotic type
ribosomal protein modification factors
AWL63_21085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOH86080
UniProt:
A0A1B3ZF80
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All DBs
Position
4617704..4619029
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AA seq
441 aa
AA seq
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MATILPSPPRVGMVSLGCPKNLVDSERILTKLRSDGYQMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAETIRARFPNVLAVTGAHQYEEVVGAVHDAAPM
PPSAFLNLVPDSGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LIAAGTRELLVISQDTSAYGVDIRHQPRPWHGAEVRAHMTDLSRELGKLGAWVRLHYVYP
YPHVDQVIPLMAEGLVLPYLDIPFQHASRNVLKLMKRPANETKVLERIKNWRTIAPDIAI
RSTFVVGFPGETEDDFAYLMDWLEEARLDRVGAFRFEPVEGAAANALPNHVPEEIKEERY
ARLMELTACISAEKLQAKVGRTLDVIIDAVGEDGATGRSKADAPEIDGEVHLRDAGHLSP
GDIVAVSIEDADEHDLYGVPL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcctcccctccccgccgcgcgtcggcatggtttcgcttggctgtcccaag
aacctcgtcgacagcgagcgcatcctcaccaagctgcgcagcgacggctaccagatgtcc
cccgactatgccggcgccgacgtcgtgctcgtcaacacctgcggcttcctcgattccgcc
aaggaagagagcctcgaagcgatcggcgaggcgatcgccgagaatggccgggttatcgtc
accggttgcatgggcaaggaagccgagacgatccgcgcgcgcttccccaatgtcctcgcc
gtcaccggcgcacaccagtatgaagaggtggtaggcgccgtccacgacgcggcaccgatg
ccgcccagcgccttcctcaatctcgtgccggacagcgggctgaagctcaccccgcgccac
tacagctatctgaagatttcggagggctgcaaccaccgctgctcgttctgcatcatcccg
agcctgcgcggggatctcgtcagccgccgccccgacgcgatcctgcgcgaagccgagaag
ctgatcgcggcgggcacgcgcgaactgctcgtcatcagccaggacacctcggcctacggc
gtcgatatccgccaccagccgcgtccgtggcacggcgcggaggtgcgcgcgcacatgacc
gacctgtcgcgcgagctgggcaagctgggcgcgtgggtccgcctccactatgtctacccc
tacccccatgtcgatcaggtcatcccgctgatggccgaggggctggtgctcccctatctc
gacattccgttccagcatgccagccgcaacgtgctcaagctgatgaagcgccccgccaac
gaaaccaaggtgctcgaacgcatcaaaaactggcggacgatcgcccccgacatcgcgatc
cgctcgaccttcgtggtcggcttccccggcgagaccgaggacgatttcgcctatctgatg
gactggctcgaagaagcccggctcgaccgtgtcggcgcgttccgcttcgaacccgtcgag
ggtgccgccgccaacgcgctgccgaaccatgtgccggaagagatcaaggaggagcgctac
gctcgcctgatggagctcaccgcgtgcatctcggcggagaagctccaggccaaggtcggc
cgcacgctcgacgtgatcatcgacgcggtcggcgaggatggcgccaccggccgctccaag
gccgatgcgcccgagatcgacggcgaggtccacctgcgcgacgccggccacctctcgccc
ggcgatatcgtggcggtctcgatcgaggatgccgacgagcacgatctgtacggcgtgccg
ctgtaa
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