Sphingomonas alpina: H3Z74_20980
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Entry
H3Z74_20980 CDS
T07078
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spap
Sphingomonas alpina
Pathway
spap03030
DNA replication
spap03410
Base excision repair
spap03420
Nucleotide excision repair
spap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3Z74_20980 (polA)
03410 Base excision repair
H3Z74_20980 (polA)
03420 Nucleotide excision repair
H3Z74_20980 (polA)
03440 Homologous recombination
H3Z74_20980 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spap03032
]
H3Z74_20980 (polA)
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_20980 (polA)
Enzymes [BR:
spap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3Z74_20980 (polA)
DNA replication proteins [BR:
spap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H3Z74_20980 (polA)
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H3Z74_20980 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3Z74_20980 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QNQ09123
UniProt:
A0A7H0LHH0
LinkDB
All DBs
Position
complement(4503090..4505846)
Genome browser
AA seq
918 aa
AA seq
DB search
MPHLYLVDGSGYIFRAYHRLPPLTNVHGEPVGAVYGYTTMLWKLADELHKADGPTHMAVI
LDKSSHTFRNELYDKYKAQRPPPPEDLVPQFPMIRDATRAFSLPCIETEGLEADDIIACY
AKAALAQGWLVTIVSSDKDLMQLIEPGLDMYDTMNNRRLGAEHVQEKFGVGPERLGDVLA
LMGDSVDNVPGVTGVGPKTASKLINEHGDLEGVLAAAPSMKPGKLRDNLIEQADMARLSR
VLVELKCDVPLPEPLDDLELKGIPEAPLRAFLAHHGFKSLLAKLSAVADTPVEVPVSTVP
QEEDPPCDHDGYETVVDEAALDRWITIAKHQGWVAIDTETTGVDATRAELVGVSMALHPN
LACYIPLAHGGTDMFAEVPVQIDRTTALAKLKTLFEDPSVLKIGHNLKYDMIVLGRAGLD
VAPFDDTILMSFDLDAGLHGHGMDELAATHLSHSCIAFKDVVGTGKNQRGFAEIDLKTAT
RYAAEDADVTLRFWRRFKPRLPAEQVTRVYEMVDRPLVPVIAQMERHGIKVDAAKLAQLS
TEFAHQMGALEVEIHALAGGAFTIGSPKQLGDVLFERMGIKGGRKGKSGVYSTDVNELER
IAADKDSPGKDIARKVLDWRQLSKLKSTYTDALQAQINPATGRVHTSYSLTGAQTGRLSS
TDPNLQNIPIRTEVGRQIRDAFVAEEGNVLLAADYSQIELRLAAHMADVPALRDAFARGD
DIHSLTAQELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVTAEEAQAMIDRYFERF
PGINNYIVQTIETVREKGCTTTLFGRKTHFPRIRSKIQHERQGAERAAINAPIQGTSADI
IKRAMARMGPALIEAGLPNVRMLLQVHDELVFELPEGDVEAARPVIERVMATAAEPAVML
SVPLGIEIGTGKSWGTAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatctctatctcgtcgacggctccggttatatcttccgcgcctatcaccggttg
ccgccactcaccaatgtgcatggcgagcctgtcggcgccgtctatggctataccaccatg
ttgtggaaactcgccgacgagctgcataaggccgacgggccgacgcatatggcggtgatt
ctcgacaagtcgagccataccttccgcaacgagctgtacgacaagtacaaggctcagcgt
ccgccgccgcccgaggatctggtaccgcaattcccgatgatccgcgatgcgacgcgcgcc
ttttcgctgccctgcatcgaaaccgagggcctggaagccgatgacatcatcgcctgctat
gccaaagccgcgctggcgcagggctggctggtgacgatcgtcagttccgacaaggatctg
atgcagctgatcgagcccgggctcgacatgtacgatacgatgaacaaccgccggctcggc
gccgagcatgtgcaggagaagttcggcgtcggacccgagcggctcggcgacgtgctcgcg
ctgatgggcgacagcgtcgacaatgtgcctggtgtgaccggcgtcggcccgaagaccgcg
tcgaaactgatcaacgagcatggcgacctggagggcgtgctcgccgccgcgccgtcgatg
aagccgggcaagctgcgcgacaatctgatcgagcaggccgatatggcgcggctcagccgc
gtgctggtcgagctgaaatgcgacgtgccgctgcccgaaccgctcgacgatctcgaactg
aagggcattcccgaggcgccgctgcgcgccttcctcgcacatcatggcttcaagtcgctg
ctcgccaagctgtcggcggtcgccgatactccggtcgaggtaccggtctcgaccgtgccg
caggaggaagacccgccgtgcgatcatgatggctatgaaaccgtggtcgatgaagcggcg
ctcgatcgctggatcaccattgcaaagcatcagggctgggtggcgatcgataccgaaacc
acgggagtggatgcgacgcgcgccgagctggtcggggtgagcatggcgctgcaccccaat
ctcgcctgctatatcccgctggcgcatggtggaaccgacatgttcgccgaggtgccggtg
caaatcgaccgcaccaccgcgctggcgaagctcaagacgctgttcgaggacccaagcgtc
ctgaagatcggccataatctgaaatacgacatgatcgtgcttggccgcgccggactcgac
gtcgcgccgttcgacgacacgatcctgatgagcttcgacctcgatgccgggctgcacggc
cacggcatggacgaactcgccgcgacgcatctgtcgcatagctgcattgccttcaaggat
gtggtcggcaccggcaagaatcagcgcgggttcgccgaaatcgacctgaagaccgcgacg
cgctacgccgccgaggacgctgacgtcaccttgcggttctggcgtcgcttcaagccgcgt
ttgcccgccgagcaggtgacgcgggtctatgaaatggtcgaccggccgctcgtgccggtg
atcgcacagatggagcggcacggcatcaaggtcgatgccgcaaagctggcacagctttcg
accgagtttgcgcaccagatgggcgcactggaagtcgagattcatgcactggccggcggt
gccttcaccatcggcagccccaagcaattgggcgatgtgctgttcgagcgcatggggatc
aagggcggccgcaagggcaagtcgggcgtctactcgactgacgtcaacgagctcgaacgg
atcgcggcggacaaggattcgcccggcaaggacattgcgcgcaaagtgctcgactggcgc
cagctgtcgaagctcaaatccacctataccgatgcgctgcaggcacagatcaacccggcg
accggccgcgtccataccagctactcgctgaccggggcgcagaccgggcgcctctcctcg
accgatcccaatctgcagaatatcccgatccgcaccgaggtcggccgccagatccgtgac
gcgtttgtggcggaggagggcaatgtcctgctcgccgccgattattcacagatcgagctg
cgcctcgctgcgcatatggccgatgtgccggcattgagggacgcgttcgcccggggcgac
gacattcacagcctgaccgcgcaggaattgttcggcgaggtcaatcgcgacacgcgcggg
cgcgccaagacgatcaacttcgcgatcctttacggcatcagccgctgggggctggccggc
cggctcgacgtcaccgcggaagaggctcaggcaatgatcgaccgctatttcgagcgcttc
ccggggatcaacaattatatcgtccagacgatcgagacagtgcgcgagaagggctgtacg
accacattgttcggccggaagacgcatttcccgcgcatcaggtcgaagattcaacacgag
cgccagggtgccgagcgcgccgcgatcaacgcgccgatccagggcaccagcgccgacatc
atcaagcgcgcgatggcgcggatggggccggcgctgatcgaggccgggctgcccaatgtc
cgcatgctgctgcaggtgcatgacgaactggtgttcgaattgcccgaaggcgatgtcgag
gcggccaggccggtgatcgaacgcgtcatggccaccgccgccgaaccggcggtgatgctc
agcgtgccgcttggcatcgagatcggtacggggaagagctggggcacggcgcattga
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