KEGG   Sphingomonas alpina: H3Z74_20980
Entry
H3Z74_20980       CDS       T07078                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
spap  Sphingomonas alpina
Pathway
spap03030  DNA replication
spap03410  Base excision repair
spap03420  Nucleotide excision repair
spap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H3Z74_20980 (polA)
   03410 Base excision repair
    H3Z74_20980 (polA)
   03420 Nucleotide excision repair
    H3Z74_20980 (polA)
   03440 Homologous recombination
    H3Z74_20980 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spap03032]
    H3Z74_20980 (polA)
   03400 DNA repair and recombination proteins [BR:spap03400]
    H3Z74_20980 (polA)
Enzymes [BR:spap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H3Z74_20980 (polA)
DNA replication proteins [BR:spap03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H3Z74_20980 (polA)
DNA repair and recombination proteins [BR:spap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     H3Z74_20980 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H3Z74_20980 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: QNQ09123
UniProt: A0A7H0LHH0
LinkDB
Position
complement(4503090..4505846)
AA seq 918 aa
MPHLYLVDGSGYIFRAYHRLPPLTNVHGEPVGAVYGYTTMLWKLADELHKADGPTHMAVI
LDKSSHTFRNELYDKYKAQRPPPPEDLVPQFPMIRDATRAFSLPCIETEGLEADDIIACY
AKAALAQGWLVTIVSSDKDLMQLIEPGLDMYDTMNNRRLGAEHVQEKFGVGPERLGDVLA
LMGDSVDNVPGVTGVGPKTASKLINEHGDLEGVLAAAPSMKPGKLRDNLIEQADMARLSR
VLVELKCDVPLPEPLDDLELKGIPEAPLRAFLAHHGFKSLLAKLSAVADTPVEVPVSTVP
QEEDPPCDHDGYETVVDEAALDRWITIAKHQGWVAIDTETTGVDATRAELVGVSMALHPN
LACYIPLAHGGTDMFAEVPVQIDRTTALAKLKTLFEDPSVLKIGHNLKYDMIVLGRAGLD
VAPFDDTILMSFDLDAGLHGHGMDELAATHLSHSCIAFKDVVGTGKNQRGFAEIDLKTAT
RYAAEDADVTLRFWRRFKPRLPAEQVTRVYEMVDRPLVPVIAQMERHGIKVDAAKLAQLS
TEFAHQMGALEVEIHALAGGAFTIGSPKQLGDVLFERMGIKGGRKGKSGVYSTDVNELER
IAADKDSPGKDIARKVLDWRQLSKLKSTYTDALQAQINPATGRVHTSYSLTGAQTGRLSS
TDPNLQNIPIRTEVGRQIRDAFVAEEGNVLLAADYSQIELRLAAHMADVPALRDAFARGD
DIHSLTAQELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVTAEEAQAMIDRYFERF
PGINNYIVQTIETVREKGCTTTLFGRKTHFPRIRSKIQHERQGAERAAINAPIQGTSADI
IKRAMARMGPALIEAGLPNVRMLLQVHDELVFELPEGDVEAARPVIERVMATAAEPAVML
SVPLGIEIGTGKSWGTAH
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcctcatctctatctcgtcgacggctccggttatatcttccgcgcctatcaccggttg
ccgccactcaccaatgtgcatggcgagcctgtcggcgccgtctatggctataccaccatg
ttgtggaaactcgccgacgagctgcataaggccgacgggccgacgcatatggcggtgatt
ctcgacaagtcgagccataccttccgcaacgagctgtacgacaagtacaaggctcagcgt
ccgccgccgcccgaggatctggtaccgcaattcccgatgatccgcgatgcgacgcgcgcc
ttttcgctgccctgcatcgaaaccgagggcctggaagccgatgacatcatcgcctgctat
gccaaagccgcgctggcgcagggctggctggtgacgatcgtcagttccgacaaggatctg
atgcagctgatcgagcccgggctcgacatgtacgatacgatgaacaaccgccggctcggc
gccgagcatgtgcaggagaagttcggcgtcggacccgagcggctcggcgacgtgctcgcg
ctgatgggcgacagcgtcgacaatgtgcctggtgtgaccggcgtcggcccgaagaccgcg
tcgaaactgatcaacgagcatggcgacctggagggcgtgctcgccgccgcgccgtcgatg
aagccgggcaagctgcgcgacaatctgatcgagcaggccgatatggcgcggctcagccgc
gtgctggtcgagctgaaatgcgacgtgccgctgcccgaaccgctcgacgatctcgaactg
aagggcattcccgaggcgccgctgcgcgccttcctcgcacatcatggcttcaagtcgctg
ctcgccaagctgtcggcggtcgccgatactccggtcgaggtaccggtctcgaccgtgccg
caggaggaagacccgccgtgcgatcatgatggctatgaaaccgtggtcgatgaagcggcg
ctcgatcgctggatcaccattgcaaagcatcagggctgggtggcgatcgataccgaaacc
acgggagtggatgcgacgcgcgccgagctggtcggggtgagcatggcgctgcaccccaat
ctcgcctgctatatcccgctggcgcatggtggaaccgacatgttcgccgaggtgccggtg
caaatcgaccgcaccaccgcgctggcgaagctcaagacgctgttcgaggacccaagcgtc
ctgaagatcggccataatctgaaatacgacatgatcgtgcttggccgcgccggactcgac
gtcgcgccgttcgacgacacgatcctgatgagcttcgacctcgatgccgggctgcacggc
cacggcatggacgaactcgccgcgacgcatctgtcgcatagctgcattgccttcaaggat
gtggtcggcaccggcaagaatcagcgcgggttcgccgaaatcgacctgaagaccgcgacg
cgctacgccgccgaggacgctgacgtcaccttgcggttctggcgtcgcttcaagccgcgt
ttgcccgccgagcaggtgacgcgggtctatgaaatggtcgaccggccgctcgtgccggtg
atcgcacagatggagcggcacggcatcaaggtcgatgccgcaaagctggcacagctttcg
accgagtttgcgcaccagatgggcgcactggaagtcgagattcatgcactggccggcggt
gccttcaccatcggcagccccaagcaattgggcgatgtgctgttcgagcgcatggggatc
aagggcggccgcaagggcaagtcgggcgtctactcgactgacgtcaacgagctcgaacgg
atcgcggcggacaaggattcgcccggcaaggacattgcgcgcaaagtgctcgactggcgc
cagctgtcgaagctcaaatccacctataccgatgcgctgcaggcacagatcaacccggcg
accggccgcgtccataccagctactcgctgaccggggcgcagaccgggcgcctctcctcg
accgatcccaatctgcagaatatcccgatccgcaccgaggtcggccgccagatccgtgac
gcgtttgtggcggaggagggcaatgtcctgctcgccgccgattattcacagatcgagctg
cgcctcgctgcgcatatggccgatgtgccggcattgagggacgcgttcgcccggggcgac
gacattcacagcctgaccgcgcaggaattgttcggcgaggtcaatcgcgacacgcgcggg
cgcgccaagacgatcaacttcgcgatcctttacggcatcagccgctgggggctggccggc
cggctcgacgtcaccgcggaagaggctcaggcaatgatcgaccgctatttcgagcgcttc
ccggggatcaacaattatatcgtccagacgatcgagacagtgcgcgagaagggctgtacg
accacattgttcggccggaagacgcatttcccgcgcatcaggtcgaagattcaacacgag
cgccagggtgccgagcgcgccgcgatcaacgcgccgatccagggcaccagcgccgacatc
atcaagcgcgcgatggcgcggatggggccggcgctgatcgaggccgggctgcccaatgtc
cgcatgctgctgcaggtgcatgacgaactggtgttcgaattgcccgaaggcgatgtcgag
gcggccaggccggtgatcgaacgcgtcatggccaccgccgccgaaccggcggtgatgctc
agcgtgccgcttggcatcgagatcggtacggggaagagctggggcacggcgcattga

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