Saprolegnia parasitica: SPRG_08796
Entry
SPRG_08796 CDS
T04137
Definition
(RefSeq) hypothetical protein
KO
K10846
DNA excision repair protein ERCC-5
Organism
spar
Saprolegnia parasitica
Pathway
spar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPRG_08796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_08796
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
SPRG_08796
SSDB
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
Other DBs
NCBI-GeneID:
24131002
NCBI-ProteinID:
XP_012203416
UniProt:
A0A067CGA7
LinkDB
Position
Unknown
AA seq
1013 aa
MGVTGLWMLLAAGGREVSIESLSGQTLAVDASIWLTQFVKAMRDPEDGSMLRNAHLLGTF
QRVAKLLFHGIRPVFVFDGDTPAIKLRTLQRRRARREKNQLSLTQTAQKLLLRQLERRAK
QAVVEEETKTEPDVIHINDDEEGEEEKKAAESPPPMPSEEENDDDDAIAEWRDHQEHVEA
FQRERRQEAREQFLTLAGKPEEYSLAQIQTFLKSSRFKREMKEQAAAANTTEAGRRIASE
ADRRYILTTANDARPAPPPAAVATDAQLLDASDSTVGLFSEYVQKQSQSQPIQRAPKILH
VDDDDDEVLIGAHGKPVVLKTDHPQWMLPKKKTSQRRGVVWEHKPDGSLVASLDPTKMQL
TAEEASILPPSLFDIDVARPQAPVKDEHIEWGDEVEAKDALVSDSDTEWEDVVTQPSNTA
PVAAPAAPITVDGGDDDDVEWLDVTPSAVPSAEIATVHATAQAASDDLPALPVPNSGTSH
AAVDVDDAASPSTALVASHDAIVIDDTSDVEDNWQDVLPPEAFAAPRPTPLDTLRPSTKV
EKPLGVGSPKATAFVVPDAALERATWNAEATPPSSPVLRPSATVLDADALGAWNDEDNLF
ERRVSKALSADDDDDVVSLGLARNDDALQAVMTTASNLTQWAAGAIKRAIRDHQQKHGGK
PLEDDATPRYLSRTTPTEPPAPVVVDSGRFLVADDGGETDAQLKRSRNQQMRDVDGVTDE
MQNDVMELLRLFGVPFIVAPMEAEAQCATLEKLGLVTGVITDDSDIFAFGGQRVYKNMFK
TSKFVEAFSMTDIERELGLDQESMIALALLLGSDYTDGIHGVGVVNATEIVHAFPGLDGL
REFKAWVHDFDLAAQLKPLPKLSEAELKALSPLERFKHTHHKVRRNWHIADAFPNAHVIK
AYQEPETDRSDARFSWSTPDLANLRIFCGRTFGWPLEKVNATLLPIVQAATRGWSKTQTR
IDSYFTSYKDGVKYAKIRSKRLQAVVQDIHETLEKQAPTKRRKRKVANAETTD
NT seq
3042 nt
+upstream
nt +downstream
nt
atgggtgtgacggggctatggatgctgcttgccgcgggtggccgcgaggtttcgatcgag
agcttgagcgggcaaacgctggccgtggacgcgagcatctggctcacgcagttcgtcaag
gccatgcgcgatccggaggatggcagcatgctgcgcaacgcgcacttgcttggcaccttc
cagcgagttgcgaagctcctcttccatggcatacgacccgtctttgtcttcgatggtgac
acgcccgcgatcaagctgcgcacgttgcagcgtcgccgcgcccggcgcgagaagaaccag
ctctcgctcacgcaaacggcgcaaaagttgctcctgcgccagctcgagcggcgagccaag
caggctgtcgttgaagaagagaccaagacggagcccgacgtcatccatatcaacgacgac
gaagaaggagaagaggaaaagaaggcggccgagagcccgccgcccatgccaagtgaggaa
gagaacgacgacgacgatgcgattgccgaatggcgagatcaccaggagcatgttgaagcc
ttccaacgtgagcgtcgtcaagaagcccgcgagcagttcttgacgcttgcgggcaagccg
gaagagtactcactcgcgcagattcagacgttcctcaagtcgagccgcttcaagcgcgag
atgaaggagcaggcggcggccgcgaacaccaccgaagccggccgccgcatcgcgagcgaa
gccgaccgccggtacatcctcacgactgcgaacgacgctcgaccggcgcctccgcctgcc
gctgtcgcgaccgatgcgcagctcctcgacgcgtcggactcgacggttgggctcttctcc
gagtatgtgcagaagcagtcgcagtcgcagccgatccaacgagcgccaaagattttgcac
gtcgacgacgacgacgacgaggtcctcatcggtgcccacggcaaaccagtcgttctaaag
acggaccacccgcagtggatgctgccgaagaagaagacgtcgcagcggcgcggtgtcgtc
tgggaacacaagccggacggcagtctcgtggcatcgctcgatccgaccaagatgcagctc
acggccgaggaagccagcattttgccgccctctctgttcgacattgacgttgcacgcccc
caggctccagtcaaggacgaacacatcgagtggggcgacgaggtcgaggccaaagacgcg
ctcgtgagcgactcggacacggagtgggaggatgtcgtgacgcaaccaagcaacaccgcg
cccgtggccgctcctgctgcgccgatcaccgtcgatggtggcgacgacgacgacgtggaa
tggctggatgtcacaccaagcgcagtgccgagtgctgaaattgcaacggtccacgcgaca
gcacaggcggccagcgacgaccttccagcgctcccagtcccaaactcgggtacctcacac
gcggcagtcgatgtcgacgacgctgcatcaccgagcacagctcttgtcgcaagccacgac
gccatcgtcattgacgacacttcggacgtcgaagacaactggcaggacgtactgccgccc
gaggcctttgctgcgccacgtccgacgccgctggatacgctacgtccttcgaccaaggtc
gagaagcctctgggagtcgggagtccgaaagccaccgcgtttgtggtacctgacgctgcg
ttggaacgagcgacatggaacgcggaggcgacaccgccatcgtcgccggtgctccgaccg
tcggcgaccgtgctcgacgcagacgccctcggcgcctggaacgacgaggacaaccttttt
gagcggcgcgtgtccaaggctttgtctgctgacgacgacgatgacgttgtctcgcttgga
ctggcccggaacgacgatgcgctgcaggcagtcatgacgacggcctccaacctcacgcaa
tgggctgctggcgccatcaagcgggcgatccgggaccatcagcaaaagcatggtggcaaa
ccgcttgaggacgacgcgacacctcggtacctctcgcggacgacgccaaccgagccgccc
gcgcccgtcgttgtcgactcgggccggttccttgttgcagacgatggcggtgagacggac
gcgcagctcaagcgatcgcggaaccagcagatgcgcgatgtcgacggcgtcacggacgag
atgcagaacgacgtcatggagctgctgcggctctttggtgttccgttcattgtggcgccg
atggaggccgaggcgcagtgcgccacgctcgaaaagctcggtcttgtgacgggcgtcatc
acggacgacagtgatattttcgcgtttggcggccaacgcgtctacaaaaacatgttcaaa
acctccaagtttgtcgaagccttctcgatgaccgacattgagcgcgaactcgggctcgac
caagagagcatgatcgccctcgcgctgctcctcggcagtgactacacggacggcatccat
ggcgtcggtgttgtcaacgccaccgagatcgtccacgcatttccgggtctcgacggcctt
cgcgagttcaaggcatgggtgcacgacttcgaccttgcggcgcagctaaagccactaccc
aagctatcggaagccgagctcaaggcgctttcgcctctcgagcgcttcaagcacacgcat
cacaaggtccggcgcaactggcacattgccgacgcctttcccaacgcgcacgtcatcaag
gcgtatcaagagcccgagacggaccgatcggacgcgcgcttctcctggtcgacaccggat
cttgccaacttgcgcatcttttgcggccgcacgtttgggtggccgctggagaaggtgaac
gcgacgctactgccgatcgtgcaggcggcgacgcgcggctggtcgaagacgcaaacacgc
atcgacagctacttcacctcgtacaaggacggcgtcaagtatgccaagattcgcagcaag
cgactccaagccgtcgtccaggacatccacgagactctggaaaagcaggcgccgaccaaa
cgccggaagcgcaaggtcgccaacgctgaaaccaccgactaa
DBGET
integrated database retrieval system