Sphingomonas paucimobilis: DRN02_008065
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Entry
DRN02_008065 CDS
T06034
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau00470
D-Amino acid metabolism
spau00550
Peptidoglycan biosynthesis
spau01100
Metabolic pathways
spau01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DRN02_008065
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DRN02_008065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DRN02_008065
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spau01011
]
DRN02_008065
Enzymes [BR:
spau01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DRN02_008065
Peptidoglycan biosynthesis and degradation proteins [BR:
spau01011
]
Precursor biosynthesis
Amino acid ligase
DRN02_008065
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QBE93995
LinkDB
All DBs
Position
complement(1722835..1723767)
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AA seq
310 aa
AA seq
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MHIAVLMGGWSAERPVSLMSGAGVADALERAGHRVTRIDMGRDVAARLVEAQPDLVFNAL
HGSPGEDGTVQGMLDLMGIAYTHSGLATSVIAIDKVLTKQALVPHGIPMPGGRIVKSEEL
FAGDPLPRPYVLKPVNEGSSVGVAIVTDTSNHGNPIARDVAGPWAEFEELLAEPYIRGRE
LTTAVLGNRALGVTELKPKNGWYDFDAKYTDGLTEHVCPAQIPDEIAEACKSLALEAHRI
LGCRGASRSDFRWDDERGVDGLFLLEVNTQPGMTPLSLVPEQGRHVGMDYDTLVQAIVDE
AIAWYKDQAG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atccatatcgcggttctgatgggcggttggtcggcggagcggccagtgtcgctgatgtcc
ggcgcgggcgtcgccgatgcgctggagcgggccggccaccgcgtcacccggatcgacatg
ggccgcgacgtcgcggccaggctggtcgaagcccagcccgatctcgtcttcaatgcgctg
cacggctctcccggcgaagacggcacggtgcagggcatgctcgatctgatgggcatagca
tacacccattcgggcctcgccacctcggtcatcgcgatcgacaaggtgctgaccaagcag
gcgctcgtgccgcacggtatccccatgccgggtggccgtatcgtcaagtcggaggagctg
ttcgccggtgatccgctgccgcgcccctatgtgctgaagccggtcaatgaggggtcgtcg
gtcggcgtcgcgatcgtcaccgacaccagcaaccacggcaatccgatcgcgcgggatgtc
gcgggtccttgggccgaattcgaggaactgctcgccgaaccctatatccggggtcgcgag
ctgacgaccgccgtgctcggcaaccgcgcgctgggcgtgaccgaactcaagcccaagaac
ggctggtatgatttcgacgccaaatataccgacggcctgaccgagcatgtctgcccggcg
cagattcccgacgagatcgccgaggcgtgcaagtcgctggcgctcgaggcacaccgcatc
ctgggctgtcgcggtgcctcgcgctccgacttccgctgggatgacgagcgcggtgtcgac
ggcctgttcctgctggaggtcaacacccagccgggtatgaccccgctcagcctggttccc
gaacagggccgccatgtcggcatggattacgacacgctggtccaggcgatcgtcgatgag
gcgatcgcctggtacaaggatcaggcgggatga
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