Sphingomonas paucimobilis: DRN02_017125
Help
Entry
DRN02_017125 CDS
T06034
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DRN02_017125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spau03021
]
DRN02_017125
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_017125
Enzymes [BR:
spau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DRN02_017125
Transcription machinery [BR:
spau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DRN02_017125
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DRN02_017125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QBE93530
LinkDB
All DBs
Position
3656886..3657950
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPNALEKKGGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDIVLNVKQLAIRMQGEGPKRLQLSATGPTTVKAGDIA
VSGDIEVMNKDLVICHLDEGATLNMELTADIGKGYVPAASNRPADAPIGLIPVDALYSPV
RQVSYKVDPTRVGQDLDYDKLTLSVETDGTVTPEDAVAYAARILQDQLALFVHFDDSALT
RAAPVGQAAIPAAGGEPQSDAQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVGKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaacgcaaagaactggcaggaactgaagaagcccaacgcgctcgaaaagaag
ggcggcgatggcaagcggaaggcgacgttcgttgccgaaccgctggagcgtggcttcggc
ctgacgctgggcaacgcgcttcgccgcgttctcctgtcgtcgctccagggcgcggcggtc
acctcgatcaagatcgagaatgtcctgcacgagttctcgtcgctggccggtgtgcgtgaa
gacgtcaccgacatcgtcctgaacgtcaagcagctcgccatccgcatgcagggcgaaggc
cccaagcgtctccagctctcggcgaccggtcccaccaccgtcaaggccggcgacatcgcc
gtgtcgggcgatatcgaggtcatgaacaaggacctggtgatctgccatctcgacgaaggc
gcgacgctcaacatggagctgaccgcggacatcgggaagggctatgtccccgccgcgtcc
aaccgtccggccgatgcgccgatcggtctgatcccggtcgatgcgctctactcgccggtg
cgccaggtgtcgtacaaggtcgacccgacccgcgtcggtcaggacctggactatgacaag
ctgacgctctcggtcgagaccgacggcaccgtcaccccggaagacgccgtggcctatgcc
gcgcgcatcctccaggaccagctggcgctgttcgtgcacttcgacgactcggcgctcacc
cgcgcggcccccgtgggccaggcggcgatccccgccgctggtggcgagccgcagagcgac
gcgcagcagatcaatcgttaccttctcaagaaggtcgacgagctggagctgtcggtgcgt
tcggcgaactgcctcaagaacgacaacatcatctatatcggcgatctggtcggcaagacc
gaagccgagatgctgcgcactccgaatttcggccgcaagtcgctgaacgagatcaaggaa
gtgctgtcgtccatgggtctgcgcctgggcatggaaatccccggctggccgcccgagaat
atcgaggaaatggccaagaagctggaacaggagatcatgggctaa
DBGET
integrated database retrieval system
