KEGG   Streptomyces parvulus: Spa2297_22420Help
Entry
Spa2297_22420     CDS       T04685                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
spav  Streptomyces parvulus
Pathway
spav03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:spav00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Spa2297_22420
Enzymes [BR:spav01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Spa2297_22420
DNA repair and recombination proteins [BR:spav03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Spa2297_22420
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: ANJ09486
UniProt: A0A191V390
LinkDB All DBs
Position
complement(4910631..4911515)
Genome map
AA seq 294 aa AA seqDB search
MAPITEVEGRRVALSNLEKVLYPASGFTKGELLHYYATAAGVLLPHLRDRAVSFLRYPDG
PDGQLFFTKNVPPGTPDWVTTAEVPRSEGPARMVLVQDLPSLMWAANLVTEFHTHQWTAD
DPGEADRLVFDLDPGPPATVVQCCEVAQWLRERLAADGIEAYAKTSGAKGLHLLAGVRGA
SSERVSEYAKALAVEAERALPRLVVHRMTRSLRPGKVFVDWSQNAARKTTAAPYTVRARE
VPAVSTPVTWDEVAGCRRAEEFVFRAADVGARVEEDGDLLAPLLDPERAAELPR
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atggcgcctatcacggaggtggaggggcggcgggtggccctcagcaatctggagaaggtg
ctgtatcccgcgtccggcttcaccaagggcgagctgctgcactactacgcgacggccgcg
ggggtgctgctgccgcatctgcgggaccgcgcggtctccttcctgcgctatccggacggc
ccggacggccagctcttcttcaccaagaacgtgccgccgggtacgcccgactgggtcacc
acggccgaggtgccccgctcggaggggcccgcccggatggtgctggtgcaggacctgccg
agcctgatgtgggcggcgaacctggtgaccgagttccacacccaccagtggacggcggac
gaccccggcgaggccgaccggctggtgttcgacctcgacccgggcccgcccgcgacggtg
gtgcagtgctgcgaggtcgcccagtggctgcgggagcggctggcggcggacgggatcgag
gcctacgccaagacgtccggggcgaaggggctgcacctgctggccggcgtgcgcggggcg
tcgtcggagcgcgtctcggagtacgcgaaggcgctcgccgtggaggcggagcgggccctg
ccgcggctggtggtgcaccggatgacgcgcagcctgcggccgggcaaggtgttcgtggac
tggagccagaacgccgcccgcaagaccaccgcagccccctacacggtccgggcccgcgag
gtcccggccgtctccactccggtgacctgggacgaggtcgccgggtgccgccgggcggag
gagttcgtgttccgggcggcggacgtcggggcccgggtggaggaggacggcgacctgctg
gctccgctgctcgaccccgaacgggcggcggagctgccccggtag

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