Streptomyces parvulus: Spa2297_32800
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Entry
Spa2297_32800 CDS
T04685
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spav
Streptomyces parvulus
Pathway
spav03030
DNA replication
spav03430
Mismatch repair
spav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spa2297_32800
03430 Mismatch repair
Spa2297_32800
03440 Homologous recombination
Spa2297_32800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spav03032
]
Spa2297_32800
03400 DNA repair and recombination proteins [BR:
spav03400
]
Spa2297_32800
Enzymes [BR:
spav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spa2297_32800
DNA replication proteins [BR:
spav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spa2297_32800
DNA repair and recombination proteins [BR:
spav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spa2297_32800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANJ11894
UniProt:
A0A191VA40
LinkDB
All DBs
Position
pSPA1:complement(194097..197693)
Genome browser
AA seq
1198 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAQKLNPMFAEVHRQGMPAVAMSDHGNMFGAYEFQQVAKDFG
SVRPIIGIEAYVAPSSRRNRRQEFWGPGGRRAVSDDGEGSKDVSGGGRFTHMTMWASGAQ
GLRNLFSLSTEASYTGQFPAGKPRMDMELIAEHAEGVIATTGCPSGAVQTRLRLNQYDEA
RATAAAYQDIFGKESYFLELMDHGLSIERDVRDGLLRLAKDLGLPLLATNDAHYVHESQA
DAHDTLLCIGVGKNKSDEKRFRFSGSGYYLKSAAEMRALFAELPEACDNTLLIAERVGSY
DEVFDNVDEMPQFPDVPDGESQESWLRREVLAGLAMRYGDPVPAEVLERFETEMSVIGPM
GFSSYFLVVADICKYARDNGVPVGPGRGSATGSIVAYATRITELCPLEHGLLFERFLNPE
RINPPDVDLDFDDRQRDKMVRYVTEKYGDEYTAMVNTFGKIKAKNAIKDSSRILGYPFSH
GERITKALPPDIMGKSIPLDGIFDPGHPRFGEAGEIRAMYEAERDVKTVIDTAKGVEGLT
RGTGVHAAAVILSKTRLTERIPLHMRASDGVKITGFDYPSCENMGLVKMDFLGLRNLGVI
DHAIQNIRENRGVRLATVDPMDGDTSTVVIPLDDGKTFELLGRGDTFGVFQLDGGGMRAL
LRLMEPTRFEDIAAALALYRPGPMAANAHTNYALRQNGKQEPDPIHPELKEVLDPILGST
HHLLIFQEQIMAIARTLAGYTLGGADMLRRAMGKKKPEVLAAEWEKFHDGMRANDYSEEA
IKAIWDVMLPFSGYAFNKSHTAGYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKAGIY
LADARKLGVTVLPPDVNESVAEFTAVGDDVRFGLRSVRNVGDNVIDTVVAARKAKGKFTG
FADFLDKADLPALNKRAIESLIKAGAFDSLGHTRRGLCAVHEAAVDAVVPLKKAAAYGQD
DLFAGLGGGTGGASGFGLEVRIDDAEWPRKQLLSIEREMLGMYVSAHPLDGTEHILAAHR
DTTIPDLLASGRTEGTVRLSGLITSVQNKVTKQGNAWAIVNLADRDGTIEVLFFPAVYQL
VLGALSEDSVISVQGRVNDRDGALSIFGQELQVLDVSAAERHGAAPVQLAFPYHRVNEPM
VRELQRIMDAHPGESPVHLSVRGPRRTTVYLLRWKVNAATIASDIKGSFGQDSWHGVA
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacagctttgttcacctgcacaatcacaccgagtactccatgctcgacggcgcc
cagaagctgaaccccatgttcgccgaggtgcatcgccagggcatgccggccgtcgcgatg
agcgaccacgggaacatgttcggggcctatgagttccagcaggtggccaaggacttcggc
tcggtcaggccgatcatcgggatcgaggcgtacgtggccccatcctctcggcggaaccga
cgacaggagttctgggggcccggtggccgacgggccgtgtcggacgacggcgagggttcg
aaggacgtcagcggtggtggccgcttcacccacatgaccatgtgggcgtcgggggcacag
ggactgcggaatctgttctcgctgtccacggaggcgtcgtacacgggccagttcccggcg
ggcaagccccgcatggacatggagctgatcgccgagcacgccgagggcgtcatcgcgacg
acgggctgtccctccggcgccgtccagacgcggctgcggctcaaccagtacgacgaagcc
cgcgcgaccgccgccgcctaccaggacatcttcggcaaggagagctacttcctggagctg
atggaccacggactgtccatcgagagggacgtgcgggacgggctgctgcgcctggcgaag
gatctgggtctgcccctgttggccaccaacgacgcgcactacgtccacgagagccaggcc
gacgcccacgacaccctgctctgcatcggcgtgggcaagaacaagtccgacgagaagcgc
ttccgcttcagcggcagcggctactacctgaagtccgcggccgagatgcgcgccctgttc
gcggagcttcccgaggcctgcgacaacacactcctgatcgccgagcgggtcgggtcctac
gacgaggtcttcgacaacgtcgacgagatgccgcagttccccgacgtgcccgacggcgag
agccaggagtcctggctgcgcagggaggtcctggccggcctcgccatgcgctacggcgat
ccggtccccgccgaggtcctggagcgcttcgagaccgagatgtccgtcatcggaccgatg
gggttctcctcgtacttcctcgtggtcgccgacatctgcaagtacgcccgcgacaacggc
gtgcccgtcggcccgggacgcggctcggccaccggctcgatcgtcgcctacgcgacccgc
atcaccgagctgtgccccctggagcacggtctgctgttcgagcggttcctcaatcccgag
cggatcaacccgccggacgtcgacctcgacttcgacgaccgtcagcgcgacaagatggtg
cggtacgtcaccgagaagtacggcgacgagtacacggccatggtgaacacgttcggcaag
atcaaggccaagaacgcgatcaaggactcgtcccggatcctcggctaccccttcagccac
ggtgaacggatcaccaaggcgctgccgccggacatcatgggcaagtcgatcccgctggac
gggatcttcgaccccggtcatccccgcttcggcgaggccggtgagatccgtgcgatgtac
gaggccgagcgggacgtcaagacggtcatcgacaccgccaagggcgtcgagggcctgacc
cgcggcaccggcgtgcacgcggccgcggtcatcctgtccaagaccaggctcaccgagcgc
atcccgctgcacatgcgcgcctcggacggcgtgaagatcaccggcttcgactaccccagt
tgcgagaacatgggcctggtcaagatggacttcctggggttgcggaacctgggcgtcatc
gaccacgccatccagaacatccgcgagaaccgcggggtcaggctcgccaccgtcgacccg
atggacggcgacacgagtaccgtcgtcattcccctggacgacgggaagaccttcgagctg
ctgggccgcggcgacaccttcggcgtgttccagctcgacggcggcggcatgcgcgcgctc
ctcaggctgatggaacccacccggttcgaggacatcgccgccgccctcgccctgtaccgt
cccggcccgatggccgccaacgcgcacacgaactacgcgctgcggcagaacggcaagcag
gaacccgatccgatccacccggaactcaaggaagtcctcgacccgatcctggggtcgacc
caccacctgctcatcttccaggagcagatcatggccatcgcccggaccctggccggctac
acgctcggcggcgcggacatgctgcgccgcgcgatgggcaagaagaagcccgaggtactg
gccgccgagtgggagaagttccacgacggcatgcgggccaacgactactcggaggaggcc
atcaaggccatctgggacgtgatgctccccttctccggctacgccttcaacaaatcccac
accgccggctacgggctcgtctcgtactggaccgcgtacctcaaggccaactacccggcc
gagtacatggcggcgctgctcacgtccgtcggcgacgacaaggacaaggcgggtatctac
ctcgccgacgcccgcaagctcggcgtcaccgtcctccctccggacgtcaacgagtcggtc
gccgagttcacagccgtcggcgacgacgtgcgcttcggccttcgctcggtccgcaacgtc
ggcgacaacgtcatcgacacggtcgtcgcggcccgtaaggccaaagggaagttcaccggc
ttcgccgacttcctcgacaaggccgacctgccggcgctcaacaagcgggccatcgaatcc
ctcatcaaggcgggcgcgttcgactcgctcggccacacccgcaggggactgtgcgccgtg
cacgaggcggccgtcgacgcggtcgtaccgttgaagaaggccgcggcctacggccaggac
gacctgttcgccgggctggggggcggtaccggcggcgcgtccggcttcggcctggaggtg
aggatcgacgacgccgagtggccgcgcaagcaacttctgtccatcgagcgggaaatgctc
gggatgtacgtctccgcccaccccctggacggcaccgagcacatcctcgccgcccaccgg
gacaccaccatccccgacctgctggcctctgggcggaccgaggggacggtgcggctctcc
gggctcatcaccagcgtccagaacaaggtgaccaagcagggcaacgcctgggcgatcgtg
aacctcgccgaccgtgacggcacgatcgaggtcctcttcttccccgccgtctaccaactc
gtcctgggcgccctgagtgaggacagcgtgatctccgtgcagggtcgcgtcaacgaccgt
gacggcgccctcagcatcttcggccaggaactccaggtcctcgacgtgtcggccgccgaa
cgccacggagcggcaccggtccagctggccttcccgtaccaccgcgtcaacgagccgatg
gtcagggagctccagcggatcatggacgcccaccccggcgagagcccggtccacctttcc
gtacgcggcccgcggaggaccacggtctatctgctccggtggaaggtgaacgcggccacg
atcgcctccgacatcaagggctcgttcggtcaggacagctggcacggtgtggcttga
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