Shewanella putrefaciens CN-32: Sputcn32_0578
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Entry
Sputcn32_0578 CDS
T00513
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spc03019
]
Sputcn32_0578
03009 Ribosome biogenesis [BR:
spc03009
]
Sputcn32_0578
Messenger RNA biogenesis [BR:
spc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sputcn32_0578
Ribosome biogenesis [BR:
spc03009
]
Prokaryotic type
rRNA processing factors
Sputcn32_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABP74310
UniProt:
A4Y2X7
LinkDB
All DBs
Position
627580..629088
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AA seq
502 aa
AA seq
DB search
MNTSRLNQNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKI
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQ
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIELEEERSRLKKITLPYVDEDG
GFIIRTAAEGVGEDELAQDAAFLRRVWSKVSERRQRRGVALLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFDELQTFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELK
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
FIDMLNEEHKTRVLNSLNSALAKDRVKTNVSGFSGLGLVEMTRKRTRESLEHVVCSECPA
CHGTGSMKTVETVSYEIFREIIRLNRAYDADEFLLYCSPAVYQSLSGEESHLIAELEVYI
SKRIRLQNEPMYSQHKYDVVMM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccagtcgcttaaatcaaaataaaatacagcgcaagatgggttcagaattactg
atcaacgtaaccccatccgaggctcgcgtcgctttagttgaacacggtgtattgcaagaa
gtgcatattgaacgccgtatgaaacggggattagtcggcaatatttataagggtaaaatc
agccgcgtgttacccggcatgcaagcggcttttgttgatataggtttagataaagctgca
tttcttcatgcttctgacatagtgccgcacactgagtgcgttgccgatgttgaaaaaggc
cacttcgttgtccgtgatatcgctgaattagtccgccaagggcaagatattatggtgcaa
gtagttaaagatcccttgggtactaagggtgcgcgtttaacaactgatatcacgctgcct
tcccgttatttagtctttatgcctggctctagccatgttggggtttcccaacgtattgag
cttgaggaagagcgcagccgtttaaagaaaatcacactcccttatgtggatgaagatggc
ggatttattattcgcacggctgccgaaggcgttggagaagatgagcttgcccaagatgcg
gcgttcttacgccgagtttggtctaaggtcagcgagcgtcgacaacgccgtggcgtggca
cttttataccaagatttagcgttgccagtgcgtattgtgcgtgattttgtcggcactgaa
ctggatcgtattcaggtcgattcacgccgcacctttgatgagttgcaaaccttcgctcaa
gaatttatgcctgaaattgctgagaaaattgagcattattcaggccctgcacctattttt
gatctctacgatgttgaaaatgaaatccagcgcgcgctgggtcgtaaagttgagttaaag
tcgggcggttatctgattatcgatcaaaccgaagctatgacgacagtggacatcaacact
ggtgcctttgtgggtcatcgtaatctcgaagaaaccatctttaataccaatctcgaagcg
acccaagccattgcaagacaactgcgcctacgcaatctaggcggcatcattattatcgac
tttatcgatatgcttaatgaagagcataaaacacgtgtgcttaatagtttaaatagtgct
ttagccaaggaccgcgttaaaacgaatgtcagtgggttttctggtttagggctggtcgag
atgacgcgtaaacgcactcgtgagagtttagagcatgtggtttgtagcgagtgtccagct
tgtcatggcacagggagtatgaagacagttgaaactgtctcctatgaaatattccgagaa
attattcgattaaatcgtgcatacgatgccgatgagtttttgctgtattgttctcctgcg
gtatatcaaagtttgagtggcgaagaaagtcatctgatcgctgagcttgaagtttatatt
agtaaacgtattcgcctgcaaaatgagcctatgtactcacagcacaaatacgatgtggtg
atgatgtag
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