Shewanella putrefaciens CN-32: Sputcn32_1022
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Entry
Sputcn32_1022 CDS
T00513
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spc03009
]
Sputcn32_1022
Enzymes [BR:
spc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Sputcn32_1022
Ribosome biogenesis [BR:
spc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sputcn32_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CT47
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ABP74751
UniProt:
A4Y468
LinkDB
All DBs
Position
1135345..1136319
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AA seq
324 aa
AA seq
DB search
MTQEINLKSEISATQTGLRLDQALAELFPDYSRTRIKEWILSDAVYVDGVIVNKPREKVF
ELQQIEIAATLEEEVHAAAQAIELNIVYEDDHILVINKQAGLVVHPGAGNADGTLMNALL
HHCPDIEHVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQAREITREYEAIVMGTMT
GGGTVDEPIGRHPTKRTHMAVHHSGKPAVTHYRVAEKFRNHTRLRLRLESGRTHQIRVHM
EYIGHVLVGDPVYGGRPKPPKAASPEFFEILKNFKRQALHAVRLELAHPVSCEIMSWQAP
IPEDMVILTKALRQDTVEHPIEYL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagattaatctaaaaagcgagatttcggcaacacaaactggcctgagatta
gatcaggcactagctgagttgttcccagattactcgcgcacgcgcatcaaggaatggatc
ctatctgatgcagtttatgttgacggggtaattgttaataagcctcgcgagaaagtattc
gagctacaacagattgaaattgctgcaactcttgaggaagaagtgcatgcagcagcacag
gccatcgagctaaatattgtctatgaggacgatcatatccttgttatcaataagcaagca
ggattagttgtgcaccctggtgctggtaatgctgatggtacgctaatgaatgcgctttta
caccattgtcccgatattgagcatgtgccgcgtgcgggtattgtgcaccgtctcgataaa
gacacgacaggtttgatggtagtggccaaaacggttgaagcacaaacccatttagtggct
gctttgcaggcccgtgaaatcactcgtgaatacgaagcgattgtgatggggactatgaca
ggtggcggtactgttgatgagccgattggccgtcatccaaccaaacgcactcatatggcg
gtgcatcactctggtaaaccagccgttacccattatcgggttgccgaaaagttccgtaat
cacacgcgtttaagattgcgccttgaatcgggtcgtacgcatcaaattcgtgtgcacatg
gaatacattggccacgtattagtgggcgatcctgtttatggtggtcgtccgaaaccacca
aaggccgcgagcccagagttttttgaaattctgaaaaactttaaacgccaagcgctacac
gctgtgcgtcttgaattagcgcacccagtgagctgtgaaatcatgagttggcaagcgcca
attcctgaagacatggtgattttaacgaaagcactgcgtcaagacacggtcgaacatccg
atcgagtatttgtaa
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