Shewanella putrefaciens CN-32: Sputcn32_3199
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Entry
Sputcn32_3199 CDS
T00513
Name
(GenBank) uncharacterized domain
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spc03009
]
Sputcn32_3199
Ribosome biogenesis [BR:
spc03009
]
Prokaryotic type
ribosomal protein modification factors
Sputcn32_3199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
ABP76911
UniProt:
A4YAC8
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Position
complement(3724683..3726869)
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGHPEGESSTYILGKDLPLEQTIANMTAMLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IANSEFVHYPNEKWFALEEDDSLPAGILDDYCLEIYNPDEELCGSHLIDTNSGNIKRGIC
AIPYTRKSDGETVYFPSNLIENLFLSNGMSAGNNLNEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMSVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCLTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNEEEAERLFGILEDLGKEVYIAEFTDLGASACRILVPDYSEIY
PVDDLIWDNTNKALAYREDILNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGKLTIIELKILIYLALGEHEEALELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDED
LELEDFIHNFTRMFGEEVMNEVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAKMAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaatcttagacttgaagccaagtttgatgatttt
accgtgaccgccgatcagccgatccgctacaaaggtgatggttctgcccctagtccgttt
gattattttttagcgtcatcagccctgtgtgcggcctatttcgtgaaggtatattgcaaa
gcccgtgatattccaacggataatattcgcctgtcgcaaaataatattgttgatcctgaa
gatcgctataaccagattttccaaattcaggttgagctacccgaagatatttccgataaa
gatcgcgaaggtattttgcgctcgattgaccgttgtaccgttaaaaaagtggtacaaacg
gggccagaatttaagattgaaaccgttgaaaacctcgatgccgatgcaaacgctatgctg
atggggcatccagagggtgagagcagcacttatatcttgggtaaagatttaccgctggag
cagaccattgccaatatgacggcgatgctcgccgatctaggcatgaagattgaaatctca
tcctggcgcaatattgtgccgaacgtgtggtcattgcatatccgcgacgcagcctcgcca
atgtgtttcaccaatggcaaaggcgcaaccaaagaaagcgcgctgtgctcggcactcggt
gagtttattgagcggttaaacaataactttttctataacgatcagttctttggcgttgag
atcgccaatagcgaatttgtgcattaccccaatgaaaagtggtttgcattagaagaagac
gattcgctgccagcggggattttggatgactattgtttagagatttataacccagatgag
gagctttgcggctcgcacttgattgacaccaattcgggcaatatcaagcgcggtatctgt
gcgattccttatacccgtaaatccgacggtgaaacggtttacttcccgtcaaacctgatt
gaaaacctcttcttaagcaatggtatgagtgcgggaaataaccttaacgaagcccatgtg
cagtgtttatcagaaatttttgaacgtgccgttaaacggcaaatcattgagcaagaaatt
gtcttgcccgatgtgcctatgtctgtgctggaaaaataccctagcattttggctggcatt
aacggtttagaagaacaaggtttccccgtggtggtaaaagatgcctcactcggcggccag
ttcccggtaatgtgtctcactttgatgaatccgaaaaccggtggtgtatttgcctctttc
ggcgcgcacccaagctttgaagtggcgttagagcgcagcctaacggaattgctgcaaggt
cgcagttttgaagggttaaacgatgtgccaaaacccacttttaacagtatggcggtgact
gagcctgaaaactttgttgagcactttatcgactcaacgggcgtgatttcatggcgcttt
tttagcagcaagcatgactatgagttctgcgaatgggatttctccggcactaacgaagaa
gaagcggaacgcttattcggcatcttagaagacctagggaaagaggtgtatattgctgag
tttaccgatttaggcgcctcggcctgtcgtattcttgtgcctgattattctgagatttat
cctgttgatgacttgatttgggacaacaccaacaaggcgttggcgtaccgtgaagatatc
ttaaatctgcattcattaagcactaaacaactggctaatttggttaaccgtttagaagaa
agccaactcgataactatacggatattcgtaccctgatcggcattgtatttgatgaaaat
accgtgtggggtaagctgacgattatcgagctgaaaatattgatttatttggcactcggt
gagcatgaagaagcccttgagttggtcggtgagttcctgcaatttaacgataacacggtt
aaacgtggtttgttctaccaagcgatgaatgccgtgctggaagtgaccttagatgaagac
ctcgaactcgaagactttatccataatttcacccgtatgtttggtgaggaagtgatgaat
gaggtggtcggtagtgtcacaggtaaagtgcgctttagcggactaaccaagaccagtatg
caacttgagggtattgagccgcacttaaggcttattgaaagctataaaaaactgcatcaa
gcccgtaaagctaaaatggctaattaa
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