Shewanella putrefaciens CN-32: Sputcn32_3443
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Entry
Sputcn32_3443 CDS
T00513
Name
(GenBank) putative TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spc03016
]
Sputcn32_3443
Transfer RNA biogenesis [BR:
spc03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Sputcn32_3443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
SOR_SNZ
DHO_dh
NanE
ThiG
Motif
Other DBs
NCBI-ProteinID:
ABP77153
UniProt:
A4YB20
LinkDB
All DBs
Position
4014081..4015049
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AA seq
322 aa
AA seq
DB search
MQIGPYQLKNQLIVAPMAGVTDQVFRNLCLRYGAALAVSEMLSSNPDVWETDKSRQRMMH
SGEEGIRSVQIAGADPDLMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSALMQNPPL
VKAILQAVVAAVNVPVTLKIRTGWAPEHRNGVQIAQIAEDCGIASLAVHGRTRQCMYKGD
AEYDTIKAIKQNVSIPVVANGDIDSPEKARFVLDYTGVDALMIGRGAQGRPWIFREIQHY
LETGNKLAPIEVAQQREVMLEHLTKLYDLYGEYKGIRFARKHMGWYLDQEAQRQFRADFN
RLETAAEQYSLVECYFDELAQN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcagattggaccctatcaactgaagaatcagctgatcgtggcaccaatggcaggtgtc
accgatcaagtcttccgtaatctctgtcttcgttatggcgcagcccttgcggtgtcagag
atgctttcatctaatcctgatgtttgggaaacagataaaagccgccaacgcatgatgcat
tctggcgaggaaggtatacgctcagtgcaaattgcaggagccgatcctgatttaatggca
caggctgctcagttcaacgttgaacaaggcgcccacatcattgatatcaatatgggatgt
cctgcaaaaaaagtgaataaaaagctggctggctcagcactgatgcaaaacccaccctta
gtaaaagccattttacaagccgtggtcgccgcagtgaatgtgcccgtcacgttaaagatt
cgcacaggttgggctccagaacacaggaacggtgttcaaatcgcccagattgctgaggat
tgtggtattgcctcactcgccgttcacggccgtacgagacaatgcatgtacaaaggcgat
gccgagtacgacaccattaaagcaatcaaacagaatgtctcgattcctgttgtcgccaat
ggggatatcgacagtccggaaaaggcccgcttcgtgctggactacactggtgtcgatgct
ctgatgataggacggggtgctcaaggacgaccttggattttcagagaaatccagcactac
ttggaaacgggtaataagctagcgcccattgaggttgcccagcaacgagaagttatgctg
gaacacctcaccaaactgtatgatttatatggcgaatataagggcatccgcttcgctaga
aaacatatgggatggtacctagaccaagaagctcagcgccaatttagggctgactttaat
cggctggaaaccgctgcagaacagtattccctcgtggaatgttattttgatgaattagca
cagaattaa
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