Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0853
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Entry
SPD_0853 CDS
T00413
Symbol
lytB
Name
(GenBank) endo-beta-N-acetylglucosaminidase precursor, putative
KO
K23989
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd00511
Other glycan degradation
spd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SPD_0853 (lytB)
Enzymes [BR:
spd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SPD_0853 (lytB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_bind_2
WW_like
Choline_bind_1
Glucosaminidase
Choline_bind_3
LytB_SH3
Motif
Other DBs
NCBI-ProteinID:
ABJ55408
UniProt:
A0A0H2ZR63
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All DBs
Position
866559..868667
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AA seq
702 aa
AA seq
DB search
MKKVRFIFLALLFFLASPEGAMASDGTWQGKQYLKEDGSQAANEWVFDTHYQSWFYIKAD
ANYAENEWLKQGDDYFYLKSGGYMAKSEWVEDKGAFYYLDQDGKMKRNAWVGTSYVGATG
AKVIEDWVYDSQYDAWFYIKADGQHAEKEWLQIKGKDYYFKSGGYLLTSQWINQAYVNAS
GAKVQQGWLFDKQYQSWFYIKENGNYADKEWIFENGHYYYLKSGGYMAANEWIWDKESWF
YLKFDGKIAEKEWVYDSHSQAWYYFKSGGYMAANEWIWDKESWFYLKFDGKMAEKEWVYD
SHSQAWYYFKSGGYMTANEWIWDKESWFYLKSDGKIAEKEWVYDSHSQAWYYFKSGGYMT
ANEWIWDKESWFYLKSDGKMAEKEWVYDSHSQAWYYFKSGGYMAKNETVDGYQLGSDGKW
LGGKATNKNAAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGLS
GYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEVGKKYYSADGLH
FDGFKLENPFLFKDLTEATNYSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALY
LLAHSALESNWGRSKIAKDKNNFFGITAYDTTPYLSAKTFDDVDKGILGATKWIKENYID
RGRTFLGNKASGMNVEYASDPYWGEKIASVMMKINEKLGGKD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtaagatttatttttttagctctgctatttttcttagctagtccagagggt
gcaatggctagtgatggtacttggcaaggaaaacagtatctgaaagaagatggcagtcaa
gcagcgaatgagtgggtttttgatactcattatcaatcttggttctatataaaagcagat
gctaactatgctgaaaatgaatggctaaagcaaggtgacgactatttttacctcaaatct
ggtggctatatggccaaatcagaatgggtagaagacaagggagccttttattatcttgac
caagatggaaagatgaaaagaaatgcttgggtaggaacttcctatgttggtgcaacaggt
gccaaagtaatagaagactgggtctatgattctcaatacgatgcttggttttatatcaaa
gcagatggacagcacgcagagaaagaatggctccaaattaaagggaaggactattatttc
aaatccggtggttatctactgacaagtcagtggattaatcaagcttatgtgaatgctagt
ggtgccaaagtacagcaaggttggctttttgacaaacaataccaatcttggttttacatc
aaagaaaatggaaactatgctgataaagaatggatttttgagaatggtcactattattat
ctaaaatccggtggctacatggcagccaatgaatggatttgggataaggaatcttggttt
tatctcaaatttgatgggaaaatagctgaaaaagaatgggtctacgattctcatagtcaa
gcttggtactacttcaaatccggtggctacatggcagccaatgaatggatttgggataag
gaatcttggttttacctcaagtttgatggcaaaatggctgaaaaagaatgggtctacgat
tctcatagtcaagcctggtactacttcaaatccggtggttacatgacagccaatgaatgg
atttgggataaggaatcttggttttatctcaaatctgatgggaaaatagctgaaaaagaa
tgggtctacgattctcatagtcaagcttggtactacttcaaatccggtggttacatgaca
gccaatgaatggatttgggataaggaatcttggttttacctcaagtctgatggcaaaatg
gctgaaaaagaatgggtctacgattctcatagtcaagcctggtactacttcaaatctggt
ggctacatggcgaaaaatgagacagtagatggttatcagcttggaagcgatggtaaatgg
cttggaggaaaagctacaaataaaaatgctgcttactatcaagtagtgcctgtcacagcc
aatgtttatgattcagatggtgaaaagctttcctatatatcgcaaggtagtgtcgtatgg
ctagataaggatagaaaaagtgatgacaagcgcttggctattactatttctggtttgtca
ggctatatgaaaacagaagatttacaagcgctagatgctagtaaggactttatcccttat
tatgagagtgatggccaccgtttttatcactatgtggctcagaatgctagtatcccagta
gcttctcatctttctgatatggaagtaggcaagaaatattattcggcagatggcctgcat
tttgatggttttaagcttgagaatcccttccttttcaaagatttaacagaggctacaaac
tacagtgctgaagaattggataaggtatttagtttgctaaacattaataatagccttttg
gagaacaagggcgctacttttaaggaagccgaagaacattaccatatcaatgccctttat
ctccttgcccatagtgccctagaaagtaactggggaagaagtaaaattgccaaagataag
aataatttctttggcattacagcctatgatacgaccccttacctttctgccaagacattt
gatgatgtggataagggaattttaggtgcaaccaagtggattaaggaaaattatatcgat
aggggaagaactttccttggaaacaaggcttctggtatgaatgtggaatatgcttcagac
ccttattggggcgaaaaaattgctagtgtgatgatgaaaatcaatgagaagctaggtggc
aaagattag
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