Solanum pennellii: 107008072
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Entry
107008072 CDS
T04130
Name
(RefSeq) dynamin-related protein 3B-like
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107008072
03029 Mitochondrial biogenesis [BR:
spen03029
]
107008072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107008072
Enzymes [BR:
spen01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
107008072
Membrane trafficking [BR:
spen04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
107008072
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
107008072
RhoA-dependent endocytosis
107008072
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
107008072
Retention of mitochondria
107008072
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107008072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
AAA_15
PBECR2
Motif
Other DBs
NCBI-GeneID:
107008072
NCBI-ProteinID:
XP_015062464
LinkDB
All DBs
Position
1:complement(104673714..104683372)
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AA seq
822 aa
AA seq
DB search
MAEEISPSNSPDAASAASLGHSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSS
VLEALVGRDFLPRGSDICTRRPLVLQLLKHNSDEEYGEFLHLPEKRFYDFNEIRWEIQAE
TEREAGGNKGVSDKQIRLKIYSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYI
KVPSCLILAVTPANSDLANSDALQIAGNADPDGYRTIGVITKLDIMDRGTDARNFLLGKV
IPLRLGYVGIVNRNQEDITMNRSIKDALVAEEKFFRNRPVYSDLADRCGVPQLAKKLNQI
LVQHIKKLLPGLKSRISAGLVSVAKEHASYGEITESKAGMGALLLNILSKYSEAFSSMIE
GKNEEMSTSELSGGARIHYIFQNIFVKSLEEVDPCEDLSDDDIRTAIQNATGAKSALFVP
EVPFEVLIRRQIARLMDPSFQCARFIYDELVKMSHRCMVNELQRFPILRKRMDEVIGNFL
REGLGPSEVMIGHLIEMEMDYINTSHPNFIGGTKAHEMALQQVKSSRIAAPNPRQKDGVD
LEKAPTSERSLKSRAILARSVGGFVPDQVVRPAPEVEKTTASGSNVGSSWGISSIFGGSD
NRASVKDNFINKPFSDTALSMDHAFSMIHLREPPSVLRPSETHSDQETIEIAITKLLLRS
YYDVVRKNIEDSVPKAIMHFLVNHTKRDLHNVFIKKLYRENLLEEMLQEPDEIAMKRKRT
RETLRVLQQAFKTLEELPLDAETVERGYSLGTDLTGLPKIHGLPSSSMYTTSSGSTGSHT
GSPKSSRLRNASHSGELQLPMYGGADSNGGGHNAGIYPTVGV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaatatcaccgtcaaactctcccgatgcggcgtcggcggcgtcattgggt
cattcagtaatacctatagtgaacaagctacaagatatattcgcacagctaggaagtcaa
tccacgattgagctgccacaggttgctgttgtagggagtcaaagtagtggcaaatcaagt
gttcttgaggcgcttgtaggtcgagatttcttgcctagagggtctgatatatgtactagg
cgacctcttgttctacagctccttaagcataattctgatgaggaatacggagagttcttg
caccttcctgagaaacgtttctatgattttaatgaaattcgttgggagattcaggcggag
acagaaagggaagcaggaggaaataaaggtgtctcggacaagcagatacggttgaaaatt
tactcaccaaatgttcttgatattactctagtggatttgcctggcataacaaaggtgcct
gttggtgatcaaccctctgatattgaagctcggatcagaactatgatcatgtcgtatatt
aaggtcccaagctgcttaatattggctgtaacaccagccaattcagacttagccaactca
gatgctcttcagattgctgggaatgctgaccctgatggttatcgaactattggcgtcatc
acaaagttggacatcatggataggggtactgatgctcgtaactttttacttggaaaagtg
attccccttcgccttggttatgttggaatagtgaatcgtaatcaggaggatattacgatg
aatcggagtattaaggatgcacttgtagctgaggagaagttcttccgcaaccgtcctgta
tatagtgatcttgctgatcgctgtggtgtacctcaattggctaaaaagttgaaccagatt
ttggtgcaacacatcaaaaaactccttccaggattgaaatcacgcattagtgctggactt
gtgtctgtcgcaaaggaacatgctagctatggggagatcaccgagtcaaaggctggtatg
ggtgctctccttctgaacattctttccaagtacagtgaagcattctcttcaatgatagaa
ggcaaaaatgaagaaatgtcaacttctgagctttctggtggagcaaggattcattacatt
tttcagaacatatttgtgaaaagcttggaggaagttgatccttgtgaagatttaagcgat
gatgacatccgaactgccattcaaaatgcaaccggtgccaaatctgcattatttgtgcca
gaggtcccttttgaagttctcatccgaaggcaaatagcacgattaatggacccgagtttt
caatgtgcacgatttatatatgatgagctggttaaaatgagccatcgttgtatggtcaat
gagttgcaacgttttccaattttgagaaagcgcatggatgaggttattggaaattttttg
cgtgaaggactgggaccttcagaagtaatgattggacaccttattgagatggagatggat
tacataaatacttcacatccaaattttattggtgggactaaagctcatgagatggcatta
cagcaggtcaagtcctctaggattgctgcacctaatccgaggcagaaagatggcgtagat
ttagaaaaagcaccaacctctgaaagaagtctaaaatcacgtgctatacttgccagatca
gttggtggttttgtccctgatcaggttgttcggcctgctccagaagttgagaaaactaca
gcatcaggatcaaatgttggttcaagttggggaatatcatcaatatttggtggctcggac
aatcgtgcatctgtaaaagacaatttcattaacaagccattcagtgatactgcactgagc
atggatcatgctttctcaatgatccacttgagagagcccccaagtgtcttgaggccttca
gaaactcattcagatcaggaaactattgaaattgccattacaaaactgttattgcggtca
tactatgacgttgtcaggaagaatattgaagactcagtacctaaagcaatcatgcatttt
ctggtaaatcacaccaaaagagatcttcacaatgtgttcatcaagaaactctacagagaa
aacctcctcgaagaaatgttgcaagaacctgatgagatagccatgaagagaaagcgtaca
cgtgagacacttcgtgttcttcagcaagctttcaagacattggaggagttaccacttgat
gctgagacagttgaaaggggttatagcttgggtactgatctgacaggccttccaaagatt
cacgggcttccatcatcatcaatgtacactacaagcagtggctcaactggttcacatacc
ggttctccaaagagctctagattgcgcaatgcatcccattcaggtgagctacagttacca
atgtatggtggcgcagattcaaacggtggtgggcataatgctggtatttatccaacagta
ggtgtataa
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