Solanum pennellii: 107008563
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Entry
107008563 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 9A isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107008563
Membrane trafficking [BR:
spen04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107008563
Protein recycling
Other Rab GTPase associated proteins
107008563
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
107008563
NCBI-ProteinID:
XP_015063141
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All DBs
Position
1:98300930..98306793
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AA seq
485 aa
AA seq
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MENSDVLGSSTAPLTWHDFLQRMRDPSAAEFVKSIKSFIVSFLNNAPDAERDSAAVQEFL
GNMETAFRAHSLWAGCSEEELESAGEGLEKYVMTKLFTRTFASLPEDVNVDEQLHEKIAL
IQQFVRPENLDIKPTFQNESSWLLAQKELQKINMYRAPRDKLVCILNCCKVINNILTSVS
AKDNPPGADDFLPVLIYVTIKANPPQLHSNLLYIQRFRRQTRLVSEAAYFFTNILSAESF
ISNIDAQALSMDETEFETNMESARALLSGLSADNNVLDQSDQNAGPVPGADTSDAKQSFR
SNRPPHPATQPNFSVASTETNIKNEDQNSKSQSSMEKIPSLSDLENRGASMLIKEDSISQ
VFQSFPYLYSQAGDLTVGDIEELLTNYKRLVIKYICLAKGSGIDNPSPPLPNNEEQTLPP
EFEFNTESEAASTGEPIDETQKDEPIDETLKDRVEDSSVLPKSLESDESKLKENEELSSK
GEEGS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcgacgtcttaggatcgtccactgcaccattgacgtggcatgatttcctt
cagcgaatgcgtgatccaagcgctgccgagttcgtcaaatccatcaaaagttttattgta
tcatttttgaacaatgctccagacgcagagagggatagtgcagccgtgcaggaattcctt
ggaaatatggaaacagcatttagagctcattcactttgggctggatgttctgaggaggag
ttggagagtgctggtgaaggacttgagaagtatgtcatgacaaagctgtttacacgaaca
tttgcttcacttcctgaagatgtgaacgttgatgaacagcttcatgagaaaattgctttg
attcaacaatttgttaggcctgagaatttggatatcaagccaacatttcaaaatgaatcg
tcatggttgcttgcacagaaggagctacaaaagataaatatgtacagggcaccaagagac
aaacttgtgtgtattcttaattgttgcaaggttatcaataatatcctgacttctgtttca
gcaaaggataaccctccaggagccgatgattttcttcccgttctcatatatgtcaccata
aaggctaacccccctcagctgcactcaaatctgctgtatatacaaaggtttaggcggcaa
actcgcctggtttctgaagcggcatacttcttcacaaacattctatctgcagaatctttc
atttcgaatattgatgcacaagctctttctatggatgagaccgagtttgaaacaaatatg
gagtctgctcgagcacttctttctggtctttcagccgacaacaatgtactggaccagagt
gatcagaatgctggacctgttcctggtgcagacacttctgacgccaaacaaagttttagg
tcaaataggcctccacaccctgctacgcagccaaatttctcagttgcatcaacagaaaca
aacattaagaacgaggatcagaattctaaaagtcagtcatcaatggaaaagatcccgtca
ctgtcggacttagaaaacagaggggctagtatgcttatcaaggaggatagcatcagccaa
gtgttccaaagtttcccctacctatattcccaggctggtgatctaacagtgggtgatatt
gaagaactgctaaccaattacaagcgcctagttatcaagtatatttgccttgctaaagga
tcaggcattgacaatccatctcctccattgcccaacaatgaagaacaaactctgccccct
gagtttgaattcaacaccgaatctgaagctgcctcaacaggagagccaattgatgagaca
cagaaagacgagccaatcgatgagacactgaaagacagggtcgaggattcttcagtactt
ccaaagtcccttgagtctgatgaatcaaagttaaaggaaaatgaagaactttcaagtaag
ggtgaagaagggagttaa
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