Solanum pennellii: 107011469
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Entry
107011469 CDS
T04130
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
KO
K14963
COMPASS component SWD3
Organism
spen
Solanum pennellii
Pathway
spen03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107011469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107011469
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
107011469
NSL complex
107011469
HMT complexes
COMPASS/SET1 complex
107011469
COMPASS/SET1 complex (yeast)
107011469
MLL-HCF complex
107011469
MLL3/MLL4 complex
107011469
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107011469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
WD40_like
RMC1_N
PROPPIN
Ge1_WD40
Big_7
DUF5888
WDR54
PQQ_2
PALB2_WD40
Cytochrom_D1
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
107011469
NCBI-ProteinID:
XP_015066470
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All DBs
Position
2:57359042..57365519
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AA seq
314 aa
AA seq
DB search
MASPIETSESFKPYELKFTLSGHKRAISSVKFSDDGKILATSSADKTARTWDVSDGSLLH
EFQGHEQGISDVAFSSDGRHLVTASDDKTVRLWDVSTGSHIKTLTGHTNYVFCVNFNPQA
NMLVSGSFDETVRLWDVKTGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWDAS
TGHCMKTIIDDENPPVSFVKFSPNGKFILVGTLDNSLRLWNFSTGKVLKTYTDHVNSKYC
ISSTFSITNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDTVISVSCNPTQNMIASGSL
GNDKTVKIWTQGGD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctattgagacttcagaatctttcaaaccctacgagcttaaattcactctc
tccggtcacaaacgcgctatttccagtgtcaaattctctgacgatggcaaaatcctagcc
acctcgtccgccgataaaaccgcccgaacatgggatgtctccgacggatcccttcttcac
gaattccaaggtcacgaacagggtatctccgatgtcgccttctcctccgacggccgtcac
ctagttactgcctccgatgacaaaactgtacgattatgggacgtttccaccggttcccat
atcaaaacccttacaggtcacacaaattatgttttttgtgttaacttcaatccccaagct
aatatgttggtttctgggtcgttcgatgagacggttaggttatgggatgtgaagactggg
aagtgtctcaaggtgctgccagcgcattccgatccagtgacggctgtgaattttaatcgg
gatggttcgttgattgtgtcaagcagctatgatgggttgtgtagaatttgggatgcttca
accgggcattgtatgaagaccataattgatgatgaaaacccacctgtgagtttcgtcaag
ttctcgcccaatggcaagtttatactcgttggcactttggataattctctgaggctttgg
aacttctcaacaggaaaagttctgaaaacttacacagaccatgtcaactcaaagtactgc
atttcatcaacattttccataacaaatggtaagtatatcgtcagtggttctgaggataat
tgtgtatatttgtgggaacttcaatcaaggaagatagttcaaaagttggaaggccatact
gataccgtgatttctgtatcatgcaaccccactcagaacatgattgcttctggttcgctt
gggaatgacaagactgtgaagatatggactcaggggggagactaa
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