KEGG   Solanum pennellii: 107012627
Entry
107012627         CDS       T04130                                 
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
spen  Solanum pennellii
Pathway
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107012627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spen03400]
    107012627
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107012627
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC
Other DBs
NCBI-GeneID: 107012627
NCBI-ProteinID: XP_015067995
LinkDB
Position
3:complement(69684877..69688741)
AA seq 393 aa
MGDAEREGGEKKKSFVIQIPSYEEVMECSSQPKTASSSSSLFNPTPSFSQAFKFVKNSEF
YSPPPPPPPSSSQSATPRQVNSSHVTASSSSSTATPSSSANRNAILVSNRQKGNPLLKHI
RNVRWTFADIVCDYLLGPNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIILCHVDVE
DVIKPLLEVTRTSLLHDCSLLCGWSLEECGRYLETVKVYENKPADLIQGQMDGDYLSRLN
HALTAIRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRLYDAFHEPFKRE
VPKRQCIPETSVANESHPGSSNTKEDEKEIVDTSNSEKKEPEVTIKSALSAAFAKYSHKI
TRKKNNKSREEEEGKCSTNEEAKTGDANGSNNC
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgggagacgcagagcgggaaggaggagagaagaagaagagcttcgtgatacagattcct
tcctatgaagaagttatggagtgttcttctcagcccaaaacggcgtcgtcttcatcttct
ctcttcaaccctacgccttctttttctcaagcattcaaattcgtcaaaaactccgaattc
tactcccctccccctcctccgcctccttcctcctctcaatccgctactcccagacaggtt
aatagttcacatgttactgcttcatcatcatcgtctacggctacgccctcatcttcagct
aatcgaaatgctatacttgttagcaatagacagaagggaaatccgttgctaaaacatatc
aggaatgtgaggtggacttttgcagatattgtttgtgactacttattgggcccgaacact
tgtgctctttatttgagcctccggtatcatctgcttcatccagactacttgtattttcgg
ataagggagttgcagaagaactttagactccgcataattttgtgccatgttgatgttgaa
gatgttatcaagcctttacttgaagttaccagaacttctctccttcatgattgttctctg
ttgtgtggatggagtttggaagaatgcggacggtacttggagacggtaaaggtttatgaa
aataagcccgccgacctcattcagggccaaatggatggggactacctatcgcggctgaat
catgctctgacggcaatacgacatgttaacaaaacagatgttgtgactcttggctcaaca
tttgggtctctttctcatgtgatggatgcatctatggaagaccttgctcgttgccctggc
ataggagagcgcaaggtaaaacgcttgtatgatgcttttcatgaacctttcaagcgagaa
gtgccaaaacgccaatgcattccagaaacttcagtcgctaatgaatctcatcctggctcc
agcaacacaaaggaagatgagaaagaaatcgtggatacaagcaacagtgagaagaaagaa
cccgaagtgactatcaagtcagcactttcagctgcttttgctaagtactcgcacaaaatt
acaagaaagaagaataataaatcacgagaagaggaagaagggaaatgcagtactaacgaa
gaagctaaaacaggagacgcaaacggcagcaacaactgctga

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