Solanum pennellii: 107012830
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Entry
107012830 CDS
T04130
Name
(RefSeq) autophagy-related protein 8C-like isoform X1
KO
K08341
GABA(A) receptor-associated protein
Organism
spen
Solanum pennellii
Pathway
spen04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107012830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107012830
04121 Ubiquitin system [BR:
spen04121
]
107012830
03029 Mitochondrial biogenesis [BR:
spen03029
]
107012830
Membrane trafficking [BR:
spen04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107012830
Ubiquitin system [BR:
spen04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
107012830
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107012830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
107012830
NCBI-ProteinID:
XP_015068252
LinkDB
All DBs
Position
3:complement(4293486..4296314)
Genome browser
AA seq
141 aa
AA seq
DB search
MFFRCLKFAVRDKSLSLSMAKSSFKVEHPLERRQAESSRIREKYPDRIPVIVERAEKSDI
SDIDKKKYLVPADLTVGQFVYVVRKRINLSAEKAIFVFVKNILPPTAALMSAIYEENKDE
DGFLYMTYSGENTFGFLELWN
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgttctttagatgtttgaaatttgcagtaagagataaaagtttgagtctttcaatggct
aagagttctttcaaggttgaacatcctttggagaggagacaggcggaatcttctcgcatc
agggagaagtatcctgacagaattccggtgatcgttgagagagcagaaaagagtgatatc
tccgacattgataagaagaagtatctcgtcccagctgacttgactgttggccaatttgtt
tacgtggtccgaaagaggatcaatctcagtgcagaaaaggccatatttgtctttgtcaaa
aacattctgcctccaactgctgctctgatgtctgcaatttacgaggaaaacaaggatgaa
gacggattcctttatatgacatatagcggtgaaaatacatttgggttcctcgagctttgg
aattaa
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