Solanum pennellii: 107020287
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Entry
107020287 CDS
T04130
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spen
Solanum pennellii
Pathway
spen00020
Citrate cycle (TCA cycle)
spen00785
Lipoic acid metabolism
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
spen01200
Carbon metabolism
spen01210
2-Oxocarboxylic acid metabolism
Module
spen_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spen_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
107020287
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
107020287
Enzymes [BR:
spen01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
107020287
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
DUF4883
Mrx7
Motif
Other DBs
NCBI-GeneID:
107020287
NCBI-ProteinID:
XP_015076068
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All DBs
Position
5:76493856..76500970
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AA seq
1019 aa
AA seq
DB search
MAWFRASSSVAKLAIRRALSQGGSYVPRTRILPSQGRYFHTTVVRPKAQAAPVPRPVPLS
KLTDSFLDGTSSVYLEELQRAWEQDPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLDLEARQIPDDLDPALYGFTEADLDREFFLGVWKMSGFLS
ENRPVQTLKAILTRLEQAYCGSIGYEYMHISDRDKCNWLRERIETPTSMEYNRERREVIL
DRLMWSTQFENFLATKWAAAKRFGLEGCETLIPGMKEMFDRAADLGVESIVIGMPHRGRL
NVLGNVVRKPLKQIFSEFSGGIKPGDDAGYVGTGDVKYHLGTSYDRPTRGGKRIHLSLVA
NPSHLEAVNPVVIGKTRAKQYYTNDEDRTKSMGILLHGDGSFAGQGVVYETLHLSALPNY
TTGGTIHIVVNNQVAFTTDPTAGRSSQYCTDVAKALDIPIFHVNGDDVEAVAHVCELAAE
WRQKFHADVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHPSSLEIYQNKLLNSGQVAK
DDVEKIHNKINRILNEEFIASKDYVPQKRDWLSAFWSGFKSPSQLSRVRNTGVKPEILTN
VGKAITTFPDGFKPHRALKRVFDDRRKMIETGEGVDWAVGEALAFATLLVEGNHVRLSGQ
DVERGTFSHRHSVIHDQETGAQYCPLDHVMMNQNEEMFTVSNSSLSEFGVLGFELGYSME
NPNSLVIWEAQFGDFANGAQVIFDQFVSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSGRL
ERFLQMSDDNPFVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKPLIVM
APKNLLRHKSCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVLCSGK
IYYELDEERAKADGKDIAICRVEQLCPFPYDLIQRELKRYPNAEVVWCQEEPMNMGAFNY
IAPRLSTAMKSLGRGNMDDIKYVGRAPSAATATGFFQVHVKEQTELVQKALQQDPINQI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtttagagctagctcaagtgtggcaaagcttgctattagaagggctctatca
cagggtggttcttacgtcccaagaactcgcatacttccatcacaaggtcgatattttcat
accacagttgtcaggccaaaggcacaagctgctcctgtcccaagaccagtgccactttcc
aagttgaccgacagctttttagatgggacgagcagtgtctaccttgaggagctccagcga
gcatgggaacaagacccaaacagcgttgatgagtcgtgggataatttcttcaggaatttt
gttggacaagctgccacgtctcccgggatttcaggccagacgattcaagagagtatgcgt
cttctgttgctcgtgagagcttatcaggttaatggtcatatgaaagcaaaacttgatcca
ttagatttagaagcgaggcaaatacctgatgatttggatccagcattatatgggttcact
gaagctgatcttgatagagagttcttccttggtgtttggaagatgtctggattcttgtct
gagaatcgtcctgtgcaaactttgaaggcaatattaacacgtcttgagcaggcttattgt
ggaagcattgggtatgagtacatgcatatttctgatcgtgataaatgcaattggttgaga
gagcggattgaaaccccaacatctatggagtacaatcgtgagcgacgggaagttattctt
gaccgactgatgtggagcactcagtttgagaacttcttggctacgaagtgggcggcagcc
aagagatttggccttgaaggttgtgagaccttgattcctggcatgaaggaaatgttcgac
cgggcagcagatcttggagttgagagcatagtcattgggatgccacatagaggaagatta
aatgttttgggtaatgttgttagaaagccactaaagcagatcttcagcgagtttagtggt
ggtataaaacctggggatgatgctggttatgttggaactggtgatgtcaagtatcacttg
ggaacttcttatgatcggcctactcggggtgggaaaagaattcatctatctttggttgca
aatccaagtcacttggaagctgtcaatccagttgttattggaaaaactagagcaaagcaa
tattatacgaatgacgaggatagaacaaagagcatgggcattttgctccatggtgatggt
agttttgcaggccaaggtgttgtctatgagacattgcatctgagtgctcttccgaattac
acaaccggagggaccattcacattgtggtgaataatcaagtggcgttcactactgatcca
acagctggaagatcatctcagtactgtactgacgttgcaaaggctttggatattccaatt
ttccatgtcaacggtgatgacgttgaggctgttgctcatgtgtgtgaacttgctgcagaa
tggcgccagaaattccatgctgatgttgtggttgatattgtctgttatcgtcgatttgga
cacaatgaaattgatgaaccatccttcacccagcctaaaatgtacaagatcatcagaaat
catccttcttcattggagatctatcaaaacaaactcctaaattccggtcaggtggcaaaa
gatgatgtggaaaagatacataataagatcaatagaatcctcaatgaagagttcattgct
agtaaagattatgtgcctcaaaaaagagactggctttctgctttttggtctggttttaag
tctccttcacagctttcacgtgttcgaaacaccggtgtcaaacctgagattttgacgaat
gtcgggaaagcaatcactacgtttccagatggttttaagcctcacagagcattaaaaagg
gtttttgatgaccgtcgaaagatgattgagacaggggagggtgtcgactgggctgttgga
gaagcacttgcttttgcaacattgcttgtggaaggtaatcatgttaggttgagtggtcag
gatgttgagagaggtactttcagtcacagacattctgttattcatgatcaggagacgggg
gctcagtactgtcctcttgatcatgttatgatgaaccaaaatgaagagatgttcactgtg
agcaacagctccctttcagagtttggtgttttgggatttgaattgggttattcaatggaa
aatccaaattcgttggtaatttgggaagctcaatttggtgattttgctaatggagctcaa
gtaatatttgaccagttcgtgagcagtggagaagcgaaatggttgcgccagactggattg
gttgtgcttttgccacatggttatgatggtcagggccctgagcattctagtggacgtttg
gaacgtttcctccagatgagtgatgacaacccgtttgttatcccggagatggaacctacg
ctaaggaagcagattcaggaatgtaattggcaggtggtgaatgtaacaactccagcaaat
tatttccatgttttgcggcgtcaaattcacagagatttccgtaagcctctcattgtgatg
gccccaaagaacttacttcgtcacaagagctgcaagtcaaatctgtccgagttcgacgat
gtccaaggtcatccaggttttgacaaacaaggtaccaggtttaagcgtctgattaaagat
cagaatgatcactctgatcttgaagagggtatcagacggctggtcctttgctcaggaaag
atctattatgagcttgacgaagaaagagctaaagctgatgggaaagacattgctatctgt
cgggtggaacagctttgtcctttcccttatgaccttatccagcgtgaattgaagcgatat
ccaaatgcagaggtagtttggtgccaagaagagccaatgaacatgggtgcattcaattac
attgcaccgcgcctttctactgccatgaaatcactaggcagaggtaacatggatgacatc
aagtatgttggtcgtgctccttctgctgccactgccactggtttcttccaggttcacgtc
aaagaacagaccgagcttgtccagaaagcgttgcagcaggatcctatcaatcaaatctga
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