Solanum pennellii: 107022595
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Entry
107022595 CDS
T04130
Name
(RefSeq) eukaryotic initiation factor 4A-8 isoform X1
KO
K03257
translation initiation factor 4A
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107022595
03012 Translation factors [BR:
spen03012
]
107022595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107022595
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107022595
mRNA cycle factors
Stress granule specific factors
107022595
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
eIF-4
107022595
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107022595
Exosomal proteins of bladder cancer cells
107022595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
107022595
NCBI-ProteinID:
XP_015078677
LinkDB
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Position
6:complement(49883017..49886253)
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AA seq
416 aa
AA seq
DB search
MAVMARLAPEGAQFDARQFDSKMNDLLAAEGKDFFTSYDEVYDSFDAMGLQENLLRGIYA
YGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLIQCQSLVLAPT
RELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVVVGTPGRVFDMLRRQS
LRPDCLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNK
PVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTD
KMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP
TQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNVVIEELPSNVADLL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcatggcacgcttggcaccagaaggagctcaatttgatgctcgacaattcgat
tctaagatgaatgatttacttgccgctgagggaaaagatttctttacttcatatgacgag
gtgtatgacagtttcgatgctatgggtctgcaagaaaatcttctcaggggcatttatgct
tatggttttgagaaaccatctgccattcagcagaggggtatcgtaccattttgcaaggga
cttgatgtaattcagcaagctcaatctggcacagggaagacagctactttttgttctgga
attttgcagcaacttgattatggtttaattcaatgccaatcattggtgttggcacctact
cgagaacttgcacagcagattgagaaggttatgcgagcacttggtgactatcttggggtt
aaggtccatgcttgtgtaggtggcactagtgtcagggaggatcagcgtattctcgcagct
ggtgttcatgttgttgttggcacccctggacgtgtgtttgacatgttgcgaagacagtcc
ctccgtcctgattgcctcagaatgtttgtgctagacgaggctgatgaaatgctgtcacga
ggttttaaggatcagatatatgatattttccagatgctgcctaccaaagttcaagtcgga
gtgttttctgcgaccatgccaccagaagcccttgacatcacaagaaagttcatgaataag
cctgtgagaatcttggttaaacgtgatgagttgacacttgagggtatcaaacagttctat
gtcaatgttgataaggaggaatggaagcttgagacgctctgtgatctatacgagacgctt
gccatcactcagagtgttatctttgtgaacactaggcgcaaggtcgattggttaacggac
aaaatgcgaagccgtgaccacacggtttcagctacacatggagatatggaccagaacact
agagacataatcatgcgtgagtttcgctctggttcttcccgtgtcctcatcacaactgat
ctgttggctcgtggtatcgatgtacaacaagtatcccttgttatcaactatgatctccca
actcagccggagaattatctccatcgtattggaagaagtggaaggtttggaaggaaagga
gttgcaatcaactttgtgacaacagacgacgaaagaatgttgtttgatattcaaaaattc
tacaatgtggtcatcgaagaactcccttcaaacgtcgctgacctcctctga
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