Solanum pennellii: 107023568
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Entry
107023568 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
spen
Solanum pennellii
Pathway
spen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107023568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023568
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107023568
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
zf-HC5HC2H
PROPPIN
Vps39_2
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
107023568
NCBI-ProteinID:
XP_015079779
LinkDB
All DBs
Position
6:complement(57124092..57134778)
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AA seq
957 aa
AA seq
DB search
MSPKPSENGIDGDDERDEEENSEEEEVEEEEEDEPRLKYQRMSASVPSLLSADAATCIAV
AERMIALGTHGGAVHILDFLGNQVKEFAAHTAAVNDLCFDTDGEYVGSCSDDGSVVINSL
FTDERMKFEYHRPMKAIALDPDYARTSSRRFVTGGLAGQLYLNVKKWLGYRDQVLHSGEG
PIHAVKWRTSLVAWANDTGVKVYDASNDQRITFIERRRGIPRPELLLPHIVWQDDSLLVI
GWGTSVKIALIRTTQSKGANGTYKHMSMSSLNQVDIVASFQTSYFISGIAPFGDSLVILA
YIPGEEDGEKDFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSLAH
APFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHINWLLQHGWHEKALEAVEAN
QGQSELLDEVGSRYLDYLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVP
YIPTENPRLRDTAYEVALVALATNPYFHKDLLSTVKSWPPRIYSTTPVFSAIEPQINTSS
MTDPLKEALAELYVIDGQHDKAFALYADLMKPDLFDFIEKHNLHDAVHEKVLQLMMIDCK
RAVLLLIQQRDLIPPSEVVSQLIAARDKCDYRYFLHLYLHSLFEVNLHAGKDYHDMQVEL
YADYDPKMLLTFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNVKQALAVIINRLGD
IEEAIEFVSMQQDDELWEELIKQSFHKPEMVGVLLEHTVGNLDPLYIVNMLPNDLEIPRL
RDRLVKIVTDYRTETSLRHGCNDILKADCMNLLVKYYKEAKRGVCLSDEVDDVSSRRGEK
SVSHLGERTMSMKSVEVKSKTRGGGRCCICFDPFSILNVSIIAFFCCHAYHTTCLMESSI
SVGGKKEAGVIAQRTASYDEYPYGVNDDYEDEEEEEEEDATSGALRMRCILCTTAAG
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaaagccatcggaaaatggaatcgacggcgacgatgagagggacgaagaagaa
aattctgaagaagaggaggtggaggaagaagaagaggatgaaccgaggttgaagtatcag
agaatgagtgcaagtgtgccgtcgcttttgtctgctgatgctgctacttgtattgccgtc
gctgaacgaatgatcgcccttggaacacacggtggagctgttcacattctcgatttcctc
ggtaatcaggttaaggagtttgctgctcacactgctgctgtcaatgacctttgctttgac
acagacggagaatacgttggtagctgctctgatgatggctctgttgtaataaatagtctt
tttactgatgagaggatgaaatttgagtatcaccgaccaatgaaggccattgctctagac
ccagactatgcaagaacatcttccagaagatttgttactggtggtttggcaggtcaattg
tatttaaatgttaagaagtggctgggctatcgtgaccaggttttgcactctggtgaaggt
ccaattcatgctgtgaagtggagaactagcctcgtcgcctgggcgaatgatacaggagtt
aaagtctatgatgcttccaatgatcagcgtataacattcattgaaagacgtcgtgggatt
ccacgccctgagctgctgctcccccatattgtttggcaggatgacagtcttttggtcatt
ggttggggaacatccgtgaaaatcgcattgataagaacgactcaaagcaaaggcgcgaat
gggacgtacaagcatatgtctatgtctagtctgaatcaggtggatatagtggcatctttt
caaaccagctatttcatttcaggaattgctccctttggtgattctttggttattctagct
tatattccgggtgaagaagatggagagaaagacttcagcagcactattccttccaggcag
ggaaatgcccaaaggccagaagtgcgtgttgtgacatggaataatgatgagctcgcgacg
gacgctcttcctgtacatggctttgagcactacaaggccaaagactattcgttggctcat
gctccattctctggtagtagctatgcaggagggcagtgggctgctggtgatgaaccttta
tactatattgtgtcccccaaggatgtggttattgcaaaaccacgggatgcagaggatcac
attaattggcttctccagcatggatggcatgagaaagctttagaagcggttgaagccaat
cagggtcagagtgaactacttgatgaggttggttcaagataccttgattatttgattgtt
gaaagaaaatatgctgaagcggcatctttgtgtccaaagttgttgcgaggatcagcttcc
gcgtgggaaagatgggttttccactttgcacatctccggcagcttccagttttggttcca
tatatcccaactgaaaacccaagattacgtgatacggcttatgaggtagctcttgttgct
ttggcgacaaatccatatttccacaaggatctgttatcgacggtcaaatcttggccacct
cgcatttattcaacaacgcctgttttctccgctattgaacctcagattaatacctcatct
atgactgatccactcaaagaggcgctagctgagttatatgtaattgatggacaacacgat
aaagcttttgctctttatgctgatcttatgaaaccggatctatttgacttcatcgaaaag
cataatttgcatgatgctgttcatgaaaaggtactccaattaatgatgatcgactgcaag
cgtgcggtactgttattaatccagcagcgcgacttaataccgccatctgaagtggtatca
cagcttattgctgcaagggataagtgtgattaccgatactttttgcatctctatcttcat
tcactatttgaagtgaatctccatgctggaaaggattaccatgacatgcaggttgagctg
tatgctgactatgatcctaagatgctgcttacctttcttagaagcagccagcactataca
ttggaaaaggcttatgaaatctgtgtgaagaaagatctactgaaagagcaagttttcatc
cttggaagaatggggaatgtgaagcaagcgcttgctgttatcattaataggttaggagat
atagaagaggcgatagaatttgtaagcatgcaacaagatgatgaactctgggaggaactg
ataaagcaaagttttcataagcctgaaatggttggtgtattgttagagcacactgtaggg
aatcttgatcccctttacattgtcaatatgttgcccaatgacctggagatacctcgtctg
agggatcgtctggtcaagattgtgacagactacaggacagagacctctcttagacatggg
tgcaatgatattcttaaggctgattgcatgaatttgttggttaaatattacaaagaagcc
aagcgtggtgtttgcttgagtgatgaagtagatgatgtatcttcccgacgaggtgagaag
agtgtttcacatctgggagagagaacaatgagcatgaaatctgtggaggtcaaatctaaa
accaggggaggtggaagatgttgcatatgctttgatccattttctatactgaatgtatca
atcattgcattcttttgttgtcatgcgtatcatacaacatgtcttatggagtcctccatt
tctgttggtggcaaaaaagaggcaggagtcattgcccagaggactgcctcatatgatgaa
tatccttatggtgttaacgatgactatgaggatgaggaagaggaagaggaagaggatgcc
acttcaggtgctctgcggatgcgttgtattttgtgtaccacagctgcaggttaa
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integrated database retrieval system
