Solanum pennellii: 107024669
Help
Entry
107024669 CDS
T04130
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 13
Organism
spen
Solanum pennellii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Orf78
SARAF
Pectate_lyase_3
Chordopox_A13L
Motif
Other DBs
NCBI-GeneID:
107024669
NCBI-ProteinID:
XP_015081145
LinkDB
All DBs
Position
7:complement(7702424..7705070)
Genome browser
AA seq
670 aa
AA seq
DB search
MAFQDFDQISERRKLERQQKMKKRIMIGVVLLLLILIAVAAAVVYFVVFKNKSGDSSSAS
KSNKNASTPPPKETETATPKVDASPPPPEAADTTPPSDKGGATAPPPNVDGAPAPAGDAA
PPAPPPDGAAAAPTGDAAPPAPSPEGGNAAAAPAPSPQGEGAMGAICAATDFSQSCGDIL
SKVVQANASGAQPTDLLKATVSAAIDEIAAGIVELDKINKDIPEKAVAHDDCIALLGDAK
KDLNASIYLLEGGVNDVATTTAELNNKLSAALTFQSMCVDGYPEADQSTVQSALKKTEEH
TTNSLVVASGLSSSSSSQPNNSAKRRLLTTRLGVPAWIKQGDRRMLDEEEGKDMKSFINM
TVAKDGSGNFSSINEALKAVPQSFEGRFFIYIKEGVYEENVVVSQVNLTFVGDGSQKSII
SGSKNIVDDLTTYQTATVAISGDGFFAYKMGFRNTAGPEKLQAVALRVQADHAIFMNCRM
EGHQSVIYAQAYRQFYRGCYITGTVDIISGNAAAVFQNCQIYLRKPMNDQKNVIIAQGRL
SKRQTTGTVLQSCSIFADDTLEHEKSKFKSYLGRPMKEYSRTIVMETDITDVIDPEGWEA
TNGDYALSTLYFGEYSNRGAGSETGSRVKWAGYQGTISKDIALNYTVESFLQGQTWLKDL
DVQVRFSLSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcaagattttgatcaaatttcagagcggaggaagctcgagagacagcaaaag
atgaagaagaggataatgattggtgttgtattgctactcctcattctcattgctgttgct
gctgctgttgtctattttgttgtgtttaaaaacaagagcggtgattcctcctccgctagt
aaatctaataagaacgcgtcaacgcctcctccaaaagaaactgaaacagcgactcctaag
gttgatgcatcacctcctccacctgaggctgctgatacaacaccaccttctgataaaggt
ggtgctactgcccctccaccaaatgtggacggagctccagcaccggctggggatgcagca
cctcctgcaccaccacctgatggtgctgcagcagcaccgactggggatgcagcacctcct
gcaccatcacccgagggtggcaacgcagcagcagccccagccccttcaccacaaggtgaa
ggagctatgggagcaatatgcgcggcaacagatttcagtcaaagttgtggggacattcta
tcaaaagttgtacaagcaaatgcctctggtgctcaacctacagatcttctcaaggcaacc
gtatctgcagctatcgatgagattgctgccggtattgtagaactagacaaaatcaacaag
gatatcccagagaaggctgttgctcatgacgattgtatagccctccttggtgatgccaaa
aaagacttgaacgcttcgatttacttgcttgaaggtggcgttaatgatgtcgccacaaca
accgctgaacttaataacaagttaagtgcagctttgacattccaaagcatgtgtgtggat
ggataccctgaagcagaccaatccacggtgcaaagcgccttgaagaaaacagaggaacac
accaccaattctctcgttgttgcctccggattgtcgtcatcatcatcctctcaaccaaat
aatagtgctaaaagacgtcttctaacaacacgattaggtgttcccgcatggattaaacaa
ggtgatcgaagaatgttggatgaagaagaaggcaaagacatgaagtcttttataaacatg
actgttgcaaaagatggtagtggtaattttagttccataaatgaagctctaaaggcagtt
ccacaaagctttgaaggaaggttctttatttatattaaagaaggagtttatgaagaaaat
gtagttgtgtcacaagtcaatcttacatttgttggagatggatcccaaaagagtattatc
tccggcagcaaaaacattgtggacgacctcacaacataccaaaccgcaacagttgctatt
tcaggagatggattttttgcatataagatgggattccgtaacacagcgggtcctgaaaaa
ttacaagcagtggctctacgagtccaagctgatcatgcaatatttatgaattgtcgtatg
gagggtcaccaaagtgtgatctatgctcaggcctatcgacaattttatcgtggatgttac
atcacaggcacagttgacatcatatcaggtaacgcggctgctgtgttccaaaactgtcaa
atttacctaaggaaaccaatgaatgaccaaaagaacgtcattatcgcacaaggaaggttg
agcaagcgccaaactacagggactgtcttgcaaagctgtagcattttcgcagacgataca
cttgaacatgaaaaatcaaagttcaagagttacttgggtcgaccaatgaaggaatactct
aggacgattgtaatggaaacggacattactgacgtaattgatccagaaggatgggaggct
acaaacggggactatgcattaagcactctgtatttcggggaatatagcaacagaggagct
ggatctgaaacgggctccagagttaaatgggctggatatcaaggcacaataagtaaggat
atcgcgttgaattacacagttgaatccttcttacaaggccaaacttggttgaaggatctc
gatgttcaagttcgttttagcctttccagctaa
DBGET
integrated database retrieval system
