Sphingobium sp. EP60837: EP837_00159
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Entry
EP837_00159 CDS
T04432
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphb03032
]
EP837_00159 (topA)
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_00159 (topA)
Enzymes [BR:
sphb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EP837_00159 (topA)
DNA replication proteins [BR:
sphb03032
]
Prokaryotic type
DNA Topoisomerases
EP837_00159 (topA)
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EP837_00159 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ANI76614
UniProt:
A0A173KS79
LinkDB
All DBs
Position
1:172762..175311
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AA seq
849 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGGDFHVLASYGHIRDLPAKDGSVDPDHGFAMSWENYGDKGK
QLKAITDEAKKATRLILATDPDREGEAISWHVQEVLRAKKALPQTVDRVTFNAITKAAVL
DAMAKPRALDEDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLVVERE
REIESFVAQEYWSVAAEMEQGGQGFTARLVRWKGEKIDRLTIGKEGDAMAAKADVEAGRF
TVEKVETKPVSRNPPPPFTTSTLQQEAARKLGFSASHTMRIAQQLYEDGAITYMRTDGVQ
MDGSAISAARKAIAERYDGGYLPEKPRQYQTKAKNAQEAHEAIRPTEFGRDKVGSGDHAR
LYDLIFKRALASQMASARLERTTIDLVDGTGQHALRATGQVVIFPGFLALYEEGRDDSED
DDSKLLPRMAEGDAPAKKKVTAEQHFTQPPPRYSEASLVKKLEELGIGRPSTYASTLQVL
KDRDYVRIEKNRFFAEESGRLVTAFLERFFERYVSYDFTAGLEDELDDISGGRAQWQAVL
EAFWKDFKPKTAEVMEQKPSDITAELDKFLEPMLFPPKADGSNPRACPMCGDGQLSLRGG
RFGAFIACSNYPECKYTRKFGQPGGKEGEDTGPEVLGQHPETGQDIVKKSGRFGPYIEMG
EGKEAKRGSIPKDLPDGEMTLDWAVKLLSLPREVGLHPETGKPIVANIGRFGPYLLHDGK
YGRLSSTAEIFEVGMNSAVAKLADAANKGGRGGASREPLKVLGKHPRTEAEIKLMAGRYG
PFVTDGTTNATLPKAVEQDALTLEEAAQLIDARAAAAPAKKGKKAPAKKAAAKKPAAKKA
PAKKKAAAE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcatcgttgagtcgcctgccaaggcgaagacaatcgagaaatatctgggc
ggggatttccacgttctggccagctatggtcatatccgcgatctgcctgccaaggacgga
tcggtggacccggatcatggtttcgccatgagttgggaaaattatggcgacaagggcaag
cagctcaaggccattaccgatgaggccaagaaggcgacgcgcctgatcctggcgactgac
cctgatcgcgaaggagaagcgatcagctggcatgtgcaggaagtgctgcgcgccaagaag
gctttgccgcagaccgtggatcgggtgacgttcaatgcgatcaccaaggccgcggtcctg
gacgccatggccaagccgcgtgcactggacgaggatttgatcgacgcctatcgggcgcgg
cgagcgctggactatctggtgggcttcacgctgtcgccggttctgtggcgcaagctgcca
ggcgccaagtcggcggggcgcgtgcagtcggttgcgctgcggctggtggtcgagcgggag
cgcgagatcgagagtttcgtcgcccaggaatattggtcggtcgcggccgagatggagcag
ggggggcagggcttcaccgcgcggctggtgcgctggaagggcgagaagatcgaccggctg
accatcggcaaggaaggcgatgccatggccgcgaaggcggatgtggaggccgggcgtttt
accgtcgagaaggtcgagacgaagccggtttcgcgcaaccctccgccgccgttcacgacc
tcgaccctgcagcaggaggctgcgcgcaaactcggcttctcggccagccatacgatgcgg
atcgcgcagcagctctacgaggacggcgcgatcacctatatgcgtacagacggcgtgcag
atggacgggagcgccatttctgccgcgcgcaaggcgatcgccgagcgctatgacggtggt
tatctgccggaaaagccgcgtcaatatcagaccaaggccaagaatgcgcaggaagcgcat
gaggccattcgtccgaccgagttcgggcgggacaaggttggcagcggcgatcatgcgcgg
ctttacgacctgatcttcaagcgggctctggcgagccagatggcctcggcacggctggag
cggacgacaatcgacctggtggatggcacaggccagcatgcgttgcgcgcgaccgggcag
gtggtgatcttcccaggtttcctggcgctttatgaagaggggcgggacgacagcgaggat
gatgactccaagctgttgccgcgcatggcggaaggcgatgcgccggccaagaagaaggtg
acggccgagcagcatttcacccagcccccgccgcgttattcggaagcttcactggtcaag
aagctggaggaattggggatcgggcgtccgtcgacctatgcctctacgctgcaggtgctg
aaggaccgcgactatgtgcggatcgagaagaaccgcttcttcgccgaggagagcgggcgg
ctggtgacggccttcctcgaacgcttcttcgaacgctatgtgtcctacgacttcactgcg
gggctggaggatgaactggacgatatttccggcggtcgtgcccagtggcaggcggtgctg
gaagccttctggaaagacttcaagcccaagaccgccgaagtgatggagcagaagccttcg
gacatcacggctgaactggacaagttccttgagccgatgctcttcccgcccaaggcggat
gggtccaatccccgcgcttgtccgatgtgcggcgatgggcagctgtcgctgcgcggcggg
cgttttggggcgttcatcgcctgctccaactatccggagtgcaaatatacgcggaagttc
ggccagccgggcggcaaggaaggcgaagatacgggacccgaggtgctgggccagcatccc
gagacggggcaggatatcgtcaagaaatccgggcgctttggaccctatatcgagatgggc
gagggtaaggaagcgaagcgcggatcgatccccaaggacctgccagatggcgagatgacg
ctggattgggcggtgaagctcttaagcctgccgcgcgaggtcgggcttcatcccgagacg
gggaagccgatcgtcgccaatatcgggcgctttggtccctacctgctgcatgacggcaaa
tatgggcggctgtcatcgactgccgagatattcgaagtcggcatgaacagcgccgtcgcc
aagctggccgatgcggcgaacaagggcggccgtggcggagcgtcgcgggagccgctcaag
gtgctcggcaagcacccgcgcaccgaggccgagatcaagctgatggcggggcgctatggg
ccttttgtcaccgatggcacgaccaatgccacgctgcccaaggcggttgagcaggatgcg
ttgacattggaggaagcggcgcaactgatcgatgcgcgcgctgcggcggcgcctgcgaag
aaggggaagaaggctccggcgaaaaaggcggctgcgaagaagcctgctgccaagaaggcg
ccggccaagaagaaggcggcggcggagtag
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