Sphingobium sp. EP60837: EP837_00823
Help
Entry
EP837_00823 CDS
T04432
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphb03009
]
EP837_00823 (rsmB)
Enzymes [BR:
sphb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
EP837_00823 (rsmB)
Ribosome biogenesis [BR:
sphb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EP837_00823 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Ubie_methyltran
Methyltransf_25
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ANI77259
UniProt:
A0A173KT02
LinkDB
All DBs
Position
1:complement(857763..858938)
Genome browser
AA seq
391 aa
AA seq
DB search
MTPSARVQAAVELLDAIIASARDGGPAADTLIARYFKERRYAGSRDRRAVRDHVYDAVRR
TAERPESGRAAMIGLARERTEIAVLFDGSPHGPAPIAPEEPGAAGGAVPAWLAPLLANPV
EQQELLGRAPVDLRVNRLKATPDKVAPLFPDAVAIDGLLDGLRLSEGWPVEQSDAWKQGL
IEVQDAGSQLISAACAVEPGMTVIDLCAGAGGKTLALAAALAGEGTLIAADTIRSRLARL
APRAERAGATFIETLLLDQGHEAGALESLNGRADVVLVDAPCSGTGTWRRNPEARWRLTP
ARLDRLVQEQARILDFAAPLLAPGGALIYATCALTDREGAGQVRGFLDRHHGWEAEQIRI
EQGRDHGGGRLLTPGHDATDGFYFARLRRMA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacgccatccgctcgcgtccaggctgcggtcgagctgctggacgccatcatcgcttcg
gcacgggatggcgggccggcggcagacacgctgatagcgcgctacttcaaggaacgacgc
tacgccggatcgcgcgaccggcgagcggtgcgcgatcatgtctatgatgcggtgcgccgc
acggcggagcgtccggagagcggtcgcgcggcgatgatcggccttgcgcgtgagcggact
gagatcgctgtattgttcgatggatcgccccatgggcctgcgcccattgcgccggaggag
ccgggggctgctggcggagccgtgcctgcatggcttgcgccgctcctcgccaatccggtc
gaacaacaggaactgctgggccgggcgcccgtcgatctgcgtgtaaaccggctgaaggcc
acgccggacaaggttgcgcccttgttccccgacgctgtcgcgatcgatggactgctggat
ggactgcgcctgtctgaaggctggcctgtcgagcagagcgatgcgtggaagcaggggttg
attgaggtgcaggatgccgggagtcagctgatctccgccgcttgcgcagtagaacccggc
atgaccgtcatcgacctgtgcgctggtgcaggcggcaagacgctggcgcttgccgcggcg
ttggcgggcgaggggacgctgattgcggctgacacgatccgatcgcggctcgcccgcctt
gcgccgcgtgcagagcgggcgggggcgacgttcatcgaaacgctgctgcttgatcagggg
catgaggcgggtgcgctggaaagcctcaacgggcgggcggatgtcgtgttggtcgatgcg
ccttgctcgggcactggcacatggcggcgcaatcccgaggcgcgttggcggttgacgcct
gcccggcttgatcggctggtgcaggaacaggcgcggattttggatttcgccgcgccgctc
ctcgcgccgggtggtgcgctgatctacgcgacctgtgcgctgacggaccgggagggggcg
gggcaggtgcgcggcttccttgatcggcatcatggatgggaagccgagcagatccggatc
gagcagggccgcgatcatggcggtgggcggctgctgacgccgggtcatgatgcgacagac
ggtttctatttcgcgcggctgcggcgcatggcatga
DBGET
integrated database retrieval system