Sphingobium sp. EP60837: EP837_01677
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Entry
EP837_01677 CDS
T04432
Symbol
rlmI
Name
(GenBank) 23S rRNA (cytosine(1962)-C(5))-methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphb03009
]
EP837_01677 (rlmI)
Enzymes [BR:
sphb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
EP837_01677 (rlmI)
Ribosome biogenesis [BR:
sphb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EP837_01677 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_25
Methyltransf_11
Methyltransf_15
MTS
Methyltransf_31
UPF0020
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
ANI78090
UniProt:
A0A173KWL5
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All DBs
Position
1:1704545..1705414
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AA seq
289 aa
AA seq
DB search
MKLHTLIGEPWADYGLIDSGHGRKLERYGRFRFIRPEPQAMWAPASADWKADGEFVPGSD
EEGGGRWVHARPVPSEGWPLSWNEVTFEASCTPFRHLGFFPDMAPVWSWMREQVEGVEQP
HIMNLFGYTGVGTLAMAAAGAQMVHVDASKKSVAQARANAAASGLEDRPVRWIVDDAAKF
VAREVRRGRRYDGILLDPPKYGRGPDGEVWRLEEDLPGLIANCRQLLDADSRFLFLTVYA
VRMSALAIGELLRQVFADLPGDVEAGELAVREEARSLALPTAIWARWRR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccatactctcatcggcgagccttgggctgattatggcctgatcgactcgggg
catggacgcaagctcgaacgctacggccgctttcgtttcatccggccggagccacaggcg
atgtgggcgcctgcaagtgccgattggaaggcagacggggagtttgttcccggttcggac
gaagaaggtggcggccgctgggtgcatgcgcgaccggtgccttcagaaggctggcctctg
tcctggaacgaagtcactttcgaagcaagttgcacaccctttcgccacttgggctttttc
ccggatatggccccggtctggagctggatgcgcgagcaggtcgaaggggtcgagcagcct
cacatcatgaacctgttcggctatactggcgtcggcacgctggcgatggcggctgcgggt
gcacagatggtccatgtcgatgcgtccaagaagtcggtggcccaggcgagagccaatgcc
gctgcttcgggattggaggatcggcctgtccgctggatcgtcgatgatgcggcaaaattt
gtcgcgcgggaagtgcggcgagggcgacgttatgacggcatattgctcgaccccccaaaa
tatggccgtgggccagatggcgaggtctggcggcttgaagaagatctgccaggccttatc
gccaattgccgtcaactgctcgatgcagacagccgcttcctgttcctcacggtctatgcg
gtgcgcatgtctgcgctcgcaatcggggaactgctgagacaagtcttcgccgacctcccc
ggtgatgtagaggcgggcgagttggccgtgcgggaggaagcgcgtagcttagcattacct
acggcgatctgggcgcgttggcggcgctga
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