Sphingomonas psychrotolerans: CVN68_19985
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Entry
CVN68_19985 CDS
T05307
Name
(GenBank) hypothetical protein
Organism
sphc
Sphingomonas psychrotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin_4
Big_9
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ATY33952
UniProt:
A0A2K8MJ89
LinkDB
All DBs
Position
complement(4384907..4389784)
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AA seq
1625 aa
AA seq
DB search
MTRAVLPRRVAVMFSSSCGQILLVRRERYEETDVPTYTGNNGNNTINGSNGNDTIYGLGG
NDRLFGRGGNDTIYGGTGNDHIEGNDGNDTLYGEDGNDDIFGGTGNDTISGGSGSDTLYG
DANDDTLTGGTGNDELRGGSGNDTLDGGGDDDQLSGGTGNDVLNGGDGNDQLSGEDNDDQ
LSGGNGNDTLYGGNGNDTLTGGAGLDYIDGGAGTDTAVYSGSLADYAIYRLGPITGVVHN
GVGGPGSGADGADLLVSVERLQFADVTIDLTGNNAPIASNDAVALTEDAGSYNSGAASVL
DNDFDFEGDTLTATPGVFNGTYGTLTLNANGTYNYVLNVTAQTLAQGQVVQDSFTYTASD
GSASDTANLVFTIIGLNDAPVAHPDAATTSENASVLIDVRANDTDVDNGAVLTVTSASAP
AGQGIASVVANQVQFAPGGDFDHLAVGATASVTVNYTIQDQFGAASASTVTITVTGTNDG
PVANPDTAATGENASVLINVLANDADADDGAVLTVTAAAAPAGQGTATVVANQVQFAPGA
DFDYLAVGESTLVTVSYSITDEHGATSASTIAVTVTGTNDAPTIDAGGTDAIGAVTELPN
GDPNEDAFTHQDSGTIAFDDLDLSDTHSASFAPQAGGYLGTFSLDPVNQAGDTVGWDFEV
DDSAIDFLDEGETLTQTYTVTVADGHGGTTTQDVTVTITGEGDNLPPDAVDDAYAVTGNA
TLTVDANDGVLANDTDDNGVGTGPGEASVTAFDATSANGGTVTVNPDGSFSYEPAVGFTG
SDSFTYTLTDADGETDTATVTVNVGPAQVWFIDNAAIGSSNLGTQADPFTSLAAFNAAQG
TPDGPGTGDTIYLREGTGTYAEADGINLLDGQTLVGGGQDLVIGAETIEQGTGRPTIVTT
GGTNNGVDLAQNNQVSGLDIGDTTGAGLADSGGSVGSLVISDVAKSGAGQIADIDQGGTL
NVTLNSAASTASAGGAIDLAGVGGSFTVTGTTTITGAHSGGGIDITGTSLTATFAGGGTV
STATATAVNFVGNTGALALGGGLDIVTTSGAGLNASGGGTVTATGAGNSVTSAGGVAVSV
IGTAIGAADLTFESISANGGSYGIRLGGTGADGGLHITGTGAVDGSGGTLQNIGIRGIEA
IDTAELELGNMTLTNANTVHGVSTDLDLSASNAAIYLSDVDGVTLGNVNINGVADTGIVG
VDVADFVMDDSSITEAGNAVHESGIEFINLSGNSSISDTEIAFAETNGLDIVNTDVDLNL
ALNNVTFRDSQTTNSGGPVNPNGDGGFQFRSFSTGAGAPVTNIDIIDSDFVRLRTQAIQI
IGDHDSIVSVDIIDNQIDSEADIGSGIDLNASGTAQFAFNVIGNTVQSRGGNAINVTSFG
GADIEGRINDNVVTANGSGSGIRVLTQDNGSTAIVEARDNSVTMGNGNGSSAVDAQARTG
NARLDLTLDNNTLDSNPGALADINITAGSSTAGETAQVYANIINNDVLAGGPANLLRLRT
SDLDGTSDPRIFLQGFVEGGPGLDDDAVATWNANGNTPVATPANVNVTQTGGATAPGAGT
ALVPDNPLPMPGFAAFDADDALFLFLDASPPHPLAEAFASPVNAFEWSETDHQTVSNYYS
DLMLL
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgcggtgcttccgcggcgtgtcgcagtcatgttttcaagctcttgcgggcag
atactgctcgtgcgccgcgaacgatacgaggagacggacgtgcccacctataccggcaat
aatggtaacaacaccatcaacggttccaacggcaacgataccatctatggtctcggtggg
aacgatcgtctctttggccgtggcggcaacgacaccatctatggtggcaccggcaacgac
catatcgagggcaatgacggcaacgacacgctctacggcgaagatggcaacgacgatatt
ttcggcggcaccggcaacgacacgatcagcggcggctcgggcagcgacacgctctacggc
gacgccaatgacgacacgctgaccggcggcaccggcaatgacgaactgcgtggcggcagc
ggcaacgatacgctggacggcggcggcgacgatgaccagctctcgggcggcaccggcaac
gacgtgctgaacggcggcgacggcaacgaccagctctccggcgaggacaatgacgaccag
ctctcgggcggcaatggcaacgacacgctctatggcggcaacggcaacgacacgctgacc
ggcggcgcggggctcgattatatcgatggcggcgcgggcaccgacactgcagtctattcg
ggctcgctggccgattacgccatctatcgcctcggcccgatcaccggcgtggtccataac
ggcgtgggcggcccgggctcgggcgcggacggcgccgatctgctggtctcggtcgagcgg
ctgcaattcgccgacgtcaccatcgatctcaccgggaacaacgcgccgatcgcatcgaac
gacgcggttgcgctcaccgaggatgccggcagctacaatagcggcgcggcgagcgtgctc
gacaacgatttcgacttcgaaggcgacacactgaccgccactcccggcgtgttcaacggc
acctatggcacgctgaccctcaacgccaacggcacctataattacgtgctcaacgtcacg
gcgcagacgctcgcgcagggacaagtggtgcaggacagcttcacctacaccgcgtccgac
ggcagcgcctcggataccgccaatctggtcttcaccatcatcggcctcaacgacgcgccg
gtcgcgcatccggacgcggcgacgaccagcgagaatgccagcgtgctgatcgacgtccgc
gccaacgacaccgatgtcgacaatggcgcggtgctcacggtcacttcggcttccgcgccc
gccggccagggcattgcatcggtggtcgccaatcaggtccagttcgctcccggcggcgac
ttcgaccatctcgcggtcggcgccactgccagcgtgacggtgaactacacgatccaggac
cagttcggcgccgcgtccgcctcgaccgtgacgatcaccgtcaccggcaccaatgacggc
ccggtcgccaatcccgacaccgccgcgacgggcgagaacgccagcgtcctgatcaacgtt
ctcgccaacgatgccgatgccgatgacggcgcggtgctcaccgtcacggccgctgcggcg
cccgccggccagggcaccgcgacggtggtcgccaatcaggtccagttcgctcccggcgcg
gactttgattacctcgcggtcggcgaaagcacattggtgaccgtcagttattcgatcacc
gacgagcacggcgcgacttccgcctcgaccattgctgtcaccgtcaccggtaccaacgat
gcgccgaccatcgacgccggtggcaccgacgccatcggcgcggtcaccgaactgcccaat
ggcgatcccaacgaggatgccttcacgcatcaggatagcggcacgatcgcgttcgacgat
ctggatctcagcgacacccacagcgcgagcttcgcgccccaggccggcggctatctcggc
acgttcagcctcgatccggtaaatcaggccggcgacactgtcggctgggacttcgaggtc
gacgacagcgcgatcgacttcctcgacgaaggcgagacgctgacccagacctacaccgtc
acggtcgccgacggccatggcggcaccaccacgcaggacgtcaccgtcaccatcaccggc
gaaggcgacaatctgccgcccgacgcagtcgacgatgcctatgcggtgaccggcaatgcc
acgctcaccgtcgatgccaatgacggcgtgctcgccaacgacaccgacgacaatggcgtc
ggcaccggccccggcgaagcctcggtcacggcgttcgacgcgacttcggccaatggcggc
acggtgaccgtcaacccggacggctcgttcagctacgagcccgccgtcgggttcaccggg
agcgacagcttcacctacacgctcaccgacgccgacggcgaaaccgacaccgcgacggtg
acggtcaatgtcggacccgcgcaggtgtggttcatcgacaatgccgcgatcggcagctct
aatctcggcacccaggccgatccgttcacgtcgctcgcggcgttcaacgcggcgcaaggc
acgcccgacggccccggtaccggcgacaccatctatctgcgcgaaggcactggcacctat
gccgaagccgacggcatcaacctgctcgacggccagacgctggtcggcggcggccaggat
ctggtgatcggcgcggagacgatcgaacagggcaccggtcggccgacgatcgtcaccacc
ggcggcaccaacaacggcgtcgatctcgcccagaacaaccaggtgtcgggcctcgacatc
ggcgacaccaccggcgccgggctggccgacagtggcggcagcgtcggcagcctcgtgatc
agcgacgtcgccaaatcgggcgcgggccagatcgccgacatcgaccagggcggcacgctg
aacgttacactcaacagcgccgcgtcgacggcgtccgccgggggcgcgatcgaccttgcc
ggagtcggcggcagcttcaccgtcaccggcacgacgacgatcaccggtgcgcatagcggt
ggcggcatcgacatcaccggcacgtcgctcaccgcgaccttcgccggcggcggcaccgtc
tcgaccgcgaccgccactgcggtgaacttcgtcggcaacaccggcgcgctcgcgctcggc
ggcgggctcgacatcgtcaccaccagcggcgcggggctcaatgcaagcggcggcggcacg
gtgaccgccaccggcgccggcaacagcgtcacgtcggcaggcggcgttgcagtaagcgtg
atcggcacagcgatcggcgccgccgatctcacgttcgagagcatctcggccaatggcggg
agctacggcatccgcctgggcggcaccggcgccgatggcgggctccacatcaccggcacc
ggcgccgtcgacggctcgggcggtacccttcagaatatcggcatccggggcatcgaagcg
atcgacaccgccgagctcgaactgggcaacatgacgctgaccaacgccaacaccgtccac
ggcgtctcgaccgatctcgacctcagcgcatcgaacgccgcgatctaccttagcgacgtg
gacggtgtgacgctcggtaatgtcaacatcaacggagtcgccgacaccggtatcgtcggc
gtcgacgtcgccgatttcgtgatggacgacagctcgatcaccgaggccggcaacgccgtc
cacgaaagcggcatcgaattcatcaatctgtcggggaattcgtcgatctcggacaccgag
atcgccttcgccgaaaccaacggcctagacatcgtcaacaccgacgtcgatctcaacctc
gccctgaacaacgtcactttccgcgacagccagacgaccaactcgggcggcccggtcaac
cccaatggcgatggcggtttccaattccgcagcttcagcaccggtgccggcgcgccggtc
accaatatcgacatcatcgacagcgatttcgtgcggctgcgaacccaggcgatccagatc
atcggcgaccatgacagcatcgtcagcgtcgacatcatcgacaaccagatcgacagcgaa
gccgatatcggcagcggcatcgatctgaacgccagcggcaccgcgcaattcgccttcaac
gtcatcggcaacaccgtccagagccgcggcggcaacgcgatcaacgtcacatcctttggc
ggtgccgatatcgaagggcggatcaacgacaacgtcgtcacagccaacgggtcaggctcg
ggtatccgggtccttacccaggacaatggcagtaccgccatcgtcgaggcgcgcgacaac
agcgtcacgatgggcaacggcaatggcagctcggcagtggacgcgcaggcacgcaccggc
aatgcccggctcgatctcacgctggacaacaatacgctcgattcgaaccccggcgcgctc
gccgatatcaacatcaccgcgggctcctcgacggccggcgagaccgcgcaggtctatgcc
aacatcatcaacaacgacgttctcgccggcggcccggccaatctgctgcggctgcgcacc
tcggatctcgacggcacctccgatccgcgcatcttcctgcagggcttcgtcgaaggcgga
cccggactcgacgacgacgccgtcgcgacatggaacgccaacggcaacacccccgtggcg
acgcccgcgaacgtcaacgtgacccagaccggtggcgcgaccgcgccgggcgcgggaacc
gcgctcgtcccggacaatccactgccgatgcccggattcgcggcgttcgacgccgacgac
gcgctgttcctgtttctcgacgcaagccccccccacccgctcgcggaagcgtttgcgagc
ccggtgaatgcgtttgaatggagcgagaccgatcatcaaacggtctcgaattactattcg
gatctgatgctgctctga
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