Rhizorhabdus wittichii DC-6: HY78_04510
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Entry
HY78_04510 CDS
T05200
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00470
D-Amino acid metabolism
sphd00550
Peptidoglycan biosynthesis
sphd01100
Metabolic pathways
sphd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HY78_04510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HY78_04510
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HY78_04510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
HY78_04510
Enzymes [BR:
sphd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HY78_04510
Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
Precursor biosynthesis
Amino acid ligase
HY78_04510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ARR52759
LinkDB
All DBs
Position
937690..938628
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AA seq
312 aa
AA seq
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MTRPLHIAVLMGGWSSEREVSLTSGNGVADALESLGHKVTRIDMDRDVALRLAEAKPDVV
FNALHGTPGEDGTVQGMMDLMGLTYTHSGLTTSVIAIDKELTKQQLVPHGIRMPEGIIVE
SESLHAGDPMPRPYVLKPVNEGSSVGVAIIKERDNHGVPIHRDSHGPWQTFATLLAEPFI
RGRELTVAVLGDRALGVTELVPSSGFYDYEAKYTDGLTTHICPADVPADIAEAAMRMALD
AHRLLGCKGTSRSDFRWDDERGEAGLYLLEVNTQPGMTPLSLVPEQARHVGLTYADLVQA
IVDEALAGKAAR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtcccctccacatcgcggtgctgatgggcggctggtcgtcggagcgcgaggtg
tcgctgacctcgggcaacggcgtcgccgacgcgctcgaaagcctgggccacaaggtgacg
cggatcgacatggaccgcgacgtcgccctgcgcctggccgaggcgaagcccgacgtggtg
ttcaacgcgctgcacgggacgccgggcgaggacggcaccgtccagggcatgatggacctg
atggggctgacctacacccattcggggctgaccacctcggtcatcgcgatcgacaaggag
ctgaccaagcagcagctcgtcccccacggcatccgcatgccggagggcatcatcgtcgag
agcgagagcctccatgccggcgatccgatgccgcgcccctatgtgctcaagcccgtcaac
gagggatcgtcggtcggcgtcgcgatcataaaagaacgtgacaatcacggcgtgccgatt
catcgtgactcgcatggcccgtggcagaccttcgcgaccctgctggcagagcccttcatc
cgggggcgcgagctgaccgtcgcggtgctcggcgatcgcgccctgggcgtgaccgagctg
gtccccagcagcggcttctatgactatgaagccaaatataccgacgggctgaccacccat
atctgccccgccgacgtccccgccgacatcgccgaggcggcgatgcggatggcgctcgac
gcgcaccggctgctcggctgcaagggcacgtcgcgctccgacttccgctgggacgacgaa
cggggcgaggccggcctctacctgctcgaggtcaacacccagccgggcatgaccccgctg
agcctggtccccgaacaggcgcgccatgtcggcctgacctatgccgacctggtccaggcg
atcgtcgacgaggcgctggccgggaaggccgcgcgatga
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