Rhizorhabdus wittichii DC-6: HY78_09550
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Entry
HY78_09550 CDS
T05200
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00730
Thiamine metabolism
sphd01100
Metabolic pathways
sphd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HY78_09550
Enzymes [BR:
sphd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HY78_09550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ARR53646
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Position
complement(1961249..1963108)
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AA seq
619 aa
AA seq
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MADIPARTEMKVTTGPIRGSRKIHVEGPQGVRVAMREIALEPSSGEPPVRVYDCSGPYTD
PNAHIDIMAGLPALRRDWILGRGDVEDYEGRAIKPEDNGLKGPDRSGGVTPFPNVVRRPL
RAKAGQNVSQMHYARRGIITPEMEYVAIRENVGRAALKEKLLRDGEDFGAAIPDFVTPEF
VRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVAAEVDKMVWSIRW
GADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQ
AEQGVDYFTIHAGVRLPFIPMTAKRVTGIVSRGGSIMAKWCLAHHRESFLYERFDEICEI
MKAYDVAFSLGDGLRPGSIADANDEAQFSELKTLGELTQIAWQHDVQVMIEGPGHVPMHK
IKANMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHL
GLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKLRDDALSRARFEFRWRDQFNLSLDPDTA
EQYHDQTLPAEGAKTAHFCSMCGPKFCSMKITQEVRDFAATRNAPADQFIAAGDAEAGMR
AMSDVFREKGGEIYLPAAE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccgatattcccgcgcgcaccgagatgaaggtgacgaccggtccgatccggggatcg
cgcaagatccatgtcgaggggcctcagggcgtccgcgtcgcgatgcgcgagatcgcgctc
gagccgtcgtcgggcgagccgccggtccgcgtctatgactgctccggcccctataccgat
cccaacgcccatatcgacatcatggccggcctgcccgcgctgcgccgcgactggattctc
gggcgcggcgacgtcgaggactatgagggccgcgcgatcaagcccgaggacaacggcctg
aaggggccggaccggtcgggcggcgtcacccccttcccgaacgtggtgcggcgcccgctg
cgcgcgaaggcagggcagaatgtcagccagatgcactatgcccggcgcggcatcatcacg
cccgagatggaatatgtcgcgatccgcgagaatgtcggccgcgccgcgctcaaggagaag
ctgctgcgcgacggcgaggatttcggcgcggcgatccccgacttcgtcaccccggaattc
gtccgcgacgaggtggcgcgcggccgggcgatcatccccagcaacatcaaccatcccgaa
tcggagccgatggcgatcggccgcaacttcctggtgaagatcaacgccaatatcggcaat
tcggcggtcgcttccgacgtcgcggccgaggtcgacaagatggtctggtcgatccgctgg
ggcgccgacacggtgatggacctgtcgaccggccgcaacatccacgacacgcgcgaatgg
atcctgcgcaactcgccggtcccgatcggcacggtgccgatctatcaggcgctggagaag
gtcggcggcatcgccgaggacctgacctgggaaatcttccgcgacacgctgatcgagcag
gccgagcagggcgtcgactatttcaccatccatgccggcgtccgcctgcccttcatcccg
atgacggccaagcgcgtcaccggcatcgtcagccggggcggatcgatcatggcgaaatgg
tgcctggcgcaccatcgcgagagcttcctctacgagcggttcgacgagatctgcgagatc
atgaaggcctatgacgtcgccttctcgctgggcgacggcctgcgccccggatcgatcgcc
gacgcaaacgacgaggcgcagttcagcgagctcaagacgctgggcgagctgacccagatc
gcctggcagcacgacgtgcaggtgatgatcgagggccccggccatgtgccgatgcacaag
atcaaggcgaacatggacaagcagctcgaagcctgcggcgaggcgcccttctacacgctc
gggccgctgaccaccgatatcgcgccgggctacgaccacatcacctcggcgatcggcgcg
gcgatgatcggctggttcggcacggcgatgctctgctacgtcacgccgaaggagcatctg
ggcctgcccgaccgcgacgacgtgaaggtcggcgtggtcacctacaagctcgccgcccac
gccgccgacctggcgaagggccacccggccgccaagctgcgcgacgacgcgctcagccgc
gcccgcttcgagttccgctggcgcgaccagttcaacctgtcgctcgatcccgacacggcc
gagcagtatcacgaccagacgctgccggccgaaggcgccaagaccgcgcatttctgctcg
atgtgcgggccgaaattctgctcgatgaagatcacccaggaggtccgcgacttcgccgcc
actaggaacgccccggccgaccagttcatcgcggccggcgacgccgaggcgggcatgcgc
gcgatgagcgacgtgttccgcgagaagggcggggagatctatctgccggcggcggagtag
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