Rhizorhabdus wittichii DC-6: HY78_11500
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Entry
HY78_11500 CDS
T05200
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HY78_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_11500
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HY78_11500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_22
AAA_29
ABC_tran
AAA_16
AAA_30
AAA_27
SbcC_Walker_B
NTPase_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARR54011
LinkDB
All DBs
Position
complement(2380103..2381173)
Genome browser
AA seq
356 aa
AA seq
DB search
MTVARLMLTDFRSYASATIAAGPGFVVLTGENGAGKTNILEAVSMLGPGRGLRGAALAEM
AREGGAGGFAVAAELSDEVRLGTGTTPAAPERRQVRINGAPASATALGEWLSLLWLTPAM
DRLFTEGAEGRRRFLDRLVLAIEPGHARHVSRYDAAMRARNKLLAAEGPPDAAWLDALEA
QLGQHGQAIAEARARTVTALALRIAAEPDAPFARAALAIEGWVPSRQPLAEELRHGRARD
VAAGRTLSGPHRQDLAVSHAAKQQPAARASTGEQKALLLGIVLAHADLVAERRGRRPILL
MDEVAAHLDPLRRAALFERLGRSGGQIWLTGTERALFDGIGEATWLAVRAGRVEAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgcccgcctgatgctgaccgacttccgcagctatgcgtcggcgacgatcgcg
gcggggccgggcttcgtcgtgctgaccggcgagaacggcgcgggcaagaccaacatcctc
gaggcggtgtcgatgctcgggcccggccgcggcctgcgcggcgcggcgctggcggagatg
gcgcgcgagggcggggcgggcggcttcgcggtcgcggccgagctgtcggacgaggtgcgg
ctcggcaccggcaccacgcccgccgcgcccgagcggcggcaggtgcggatcaacggcgcg
cccgcctcggccaccgcgctcggcgaatggctgtcgctgctgtggctgaccccggcgatg
gaccggctgttcaccgagggggccgagggtcgccgccgcttcctcgaccggctcgtcctc
gcgatcgagcccggccatgcccgccatgtcagccgctacgacgcggcgatgcgcgcgcgc
aacaagctgctcgccgccgaggggccgcccgacgccgcctggctcgacgcgctggaagcg
cagctcggccagcacggccaggcgatcgccgaggcgcgcgcgcgcaccgtcaccgcgctg
gcgctgcgcatcgccgccgagcccgacgcccccttcgcccgcgcggcgctggcgatcgag
ggctgggtcccgtcgcgccaaccgctcgccgaggagctgcgccacggccgcgctcgcgac
gtcgccgccggccgcaccctgtcgggcccgcaccgccaggacctcgccgtctcccacgcc
gccaagcagcagcccgccgcccgcgcatcgaccggcgagcagaaggcgctgctgctcggc
atcgtcctcgcccatgccgacctcgtcgccgagcggcgcggccggcgaccgatcctgctg
atggacgaggtcgccgcccatctcgaccccctccgccgcgccgcgctgttcgagcgcctc
ggccggagcggcggccagatctggctgaccggcaccgaacgcgcgctgttcgacgggatc
ggagaggcgacctggctggcggtgcgcgcgggccgggtggaggcggcctga
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