Rhizorhabdus wittichii DC-6: HY78_13380
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Entry
HY78_13380 CDS
T05200
Name
(GenBank) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HY78_13380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_13380
Enzymes [BR:
sphd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HY78_13380
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HY78_13380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EspB_PE
Motif
Other DBs
NCBI-ProteinID:
ARR54348
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All DBs
Position
complement(2765826..2766470)
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AA seq
214 aa
AA seq
DB search
MSLSAEQLHRSIDALAGIEPAIARMLEAIGYPPPRIRDRGYQTLLRTIVGQQVSVAAANA
IWAKMETMVGAGLAPEAVAAAPDDLLRATGLSRQKIAYARSLAEHVASGTIDFDRLPADD
EEAIAQMTAIKGIGRWSAEIYLLFAEGRGDVWPAGDLAVQIEVGRLLGLPERPSERETRR
LAHGWSPHRGAAAIFAWHSYNARASTAKTDKMPL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttccgccgaacagctccaccggagcatcgatgcgctggcgggcatcgaaccg
gccatcgcgcgcatgctggaagcgatcggctaccccccgccccgcatccgcgatcgcggc
taccagacgctgctgcggacgatcgtcggccagcaggtgagcgtcgccgccgccaatgcg
atctgggcgaagatggagacgatggtcggtgccggcctcgcccccgaggcggtcgccgcc
gcccccgacgacctgctccgcgccaccggcctgtcgcggcagaagatcgcctatgccagg
agcctggccgagcatgtcgcgagcggcacgatcgatttcgaccggctgcccgccgacgac
gaggaggcgatcgcgcagatgaccgcgatcaaggggatcggccgctggtcggcggagatc
tacctgctgttcgccgaagggcgcggcgacgtctggccggccggcgacctcgccgtgcag
atcgaggtcggccgcctgctgggcctgcccgagcggccgagcgagcgcgagacgcggcgc
ctggcacatggctggagcccgcatcggggcgccgccgcgatcttcgcctggcatagctac
aacgcgcgcgccagcacggccaagaccgacaagatgccgctctga
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