KEGG   Rhizorhabdus wittichii DC-6: HY78_29785
Entry
HY78_29785        CDS       T05200                                 
Name
(GenBank) conjugal transfer protein TrbC
  KO
K20528  type IV secretion system protein TrbC
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HY78_29785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_29785
Secretion system [BR:sphd02044]
 Type IV secretion system
  Trb secretion system protein
   HY78_29785
SSDB
Motif
Pfam: TrbC DUF6653 BaxI_1
Other DBs
NCBI-ProteinID: ARR57691
LinkDB
Position
pDC03:54933..55256
AA seq 107 aa
MNIRNLIRRGRAAVFVAVLSLISSPAFAGGSGMPWEDPLQQIADSLTGPVAKIAGILAVA
LAGLGFAFSEGGGFMRKVLGIVFGLAIAFAASTFFIPFFGFSGGAGF
NT seq 324 nt   +upstreamnt  +downstreamnt
atgaacattcggaacctcatcaggcgagggcgcgcggcggttttcgtcgctgtcctctcg
ctcatatcgtccccggccttcgcgggcggctccgggatgccgtgggaagacccgctgcaa
cagatcgccgattcactgaccggccccgtcgccaagatcgcgggcatcctcgccgtcgcc
ctcgcgggccttggctttgctttctccgaaggcggcgggttcatgcgtaaggtgctgggc
atcgtcttcggcctcgccatcgcctttgccgcgagcaccttcttcatcccgttcttcggc
ttctctggcggcgcgggtttctga

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