Rhizorhabdus wittichii DC-6: HY78_30275
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Entry
HY78_30275 CDS
T05200
Name
(GenBank) conjugal transfer protein TraD
Organism
sphd
Rhizorhabdus wittichii DC-6
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
DUF87
AAA_22
FtsK_SpoIIIE
cobW
SRP54
AAA_19
NACHT
ABC_tran
T2SSE
ATP_bind_1
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARR57788
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Position
pDC04:complement(45639..47933)
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AA seq
764 aa
AA seq
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MAREDIRSNGKNIPLTHHSARGRVQRNSGNFTRGSQLLTHEMLMWFSGARLPIMVWFFAF
LAAWFVILSIRLDEHGFQLVCMKIYSALWNWVDLNPNKRVNVTLPNGEIYKTVMPVVPYI
PAVQQAWETTIRALIGSILVSVFVVAPLTIWFVDISRRRGRSILQERHERGAMLVDRAVL
VSEIAQHNAEKFAEDAREFFPGRSSAAVLKLPFATRKAGGIHHPYTLAGIPYPHRLEQSH
SMLIGTTGAGKTTELRSLVSQMRQRQDSAVIFDLTGAYVEAFYDPMRDTILNPMDQRCPA
WSIFNDCSTYSHFTSAAAALIPSDGGSSEPFWALAARTLFIEMCVRLQERGQTTNLALAE
NLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGEPFSIRHW
MTTERAPGSILFVTSDYDDLEMNRPLLTLWMNIAITSLMTLPRTRSLRTWFMFDEVGALH
RLPAIEKGLQTARNFGGAMILGLHSFQKLVEVYGEEGARNLASLARSKLILATSEFKTAE
ECSQYIGNREVRQMDEAYSYGYNNNRDASTLTPRKQVEPLVIPDDITNLPSMHGFVKFPD
GFPAARILLEWKNYPIVAPGFLKRPVMQPVRSKRGEEIFDEEGGEAGGRDGAVQIVDEVV
EPTNLAKEMAARILQSPSEDQAAETHRTAPRSDDRPVPPQAKGAGGGKEDGARGRDAQQE
TGQRPADDRRGPSPQAPQVEDQTLIELRQGFAAGRDQDDLDMGI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgaggacatccgctcgaacgggaaaaacatcccgctgacccaccactctgcg
cgcggccgcgtgcagcgaaactcgggcaatttcacccgcggctcacagcttctcacccac
gagatgctgatgtggttttcgggcgcgcggctgcccatcatggtctggttcttcgccttc
ctcgcggcctggttcgtcatcctctcgatccgcctcgacgagcacggattccagctcgtc
tgcatgaagatctattcggcgctctggaactgggtcgacctcaatcccaacaagcgcgtc
aacgtcaccctgcccaatggcgagatctacaaaacggtcatgcccgtggtgccctatatc
ccggccgtgcagcaggcctgggagaccaccatccgggcgctgatcggctcgatcctcgtc
tcggttttcgtggtcgcgccactcaccatctggttcgtcgacatctcgcgcaggcgtggg
cgttcgatccttcaggaacgccatgagcgcggcgccatgctggtcgatcgcgccgtgctg
gtctccgaaatcgcgcagcacaatgcggaaaaattcgcggaggacgcgcgcgagttcttc
cccggccgctcgtccgccgccgtgctcaaattgccgttcgcgacacggaaggcgggcggc
atccaccatccctatacgctcgccggcatcccctatccgcaccgcctcgagcagtcccat
tccatgctgatcggcaccaccggcgcgggcaagaccaccgagctcaggagtctggtcagc
cagatgcgccagcgccaggacagcgccgtgatcttcgatctcaccggcgcctatgtcgaa
gccttctacgatcccatgcgcgacacgatcctgaacccgatggaccagcgctgcccggcc
tggtcgatcttcaacgactgctcgacctacagccatttcacgtcggccgccgcggcgctc
attccctccgatggcggctcgtccgagcccttctgggcgctcgcggcccgcaccctgttc
atcgagatgtgcgtccggcttcaggagcgcggccagaccaccaacctggcgctcgccgag
aacctgatgaccgccgatttgaagcgggtgcatcgcttcctcgcgaacaccatcgccgac
ccgctgaccgccccggaagcggcccgcatggcggaatcgatccgcgccgtcttcaacacc
aatgcgcaggtcctgcgtttcctgcccgacgaaggagagccgttctcgatccggcactgg
atgaccaccgagcgcgcgcccggatcgatcctgttcgtcacctccgactacgacgatctg
gagatgaaccggccgctgctgacgctctggatgaacatcgccatcaccagcctcatgacg
ctgccgcgcacgcgcagcttgcggacctggttcatgttcgatgaggtcggcgcgctgcac
cgcctgcctgcgatcgagaagggcctgcagaccgcgcggaacttcggcggcgcaatgatc
ctggggctccacagcttccagaagctggtcgaggtctatggcgaggaaggcgcgcgaaat
ctcgcctcgctcgcccgctccaagctcatcctcgcgaccagcgagttcaagaccgccgag
gagtgctcgcagtacatcggcaaccgcgaagtgcggcagatggatgaggcctatagctac
ggctacaacaacaatcgcgacgcctcgaccctgactccgcgcaagcaggtcgagcccctc
gtgatccccgacgacatcaccaacctgccctcgatgcacgggttcgtgaaattccccgac
ggtttcccggccgcgcgcatccttctcgaatggaagaactaccccatcgtggcgccgggc
ttcctgaagcgtcccgtgatgcagcccgtccggtccaagcgcggggaggagattttcgac
gaggagggcggtgaggccggcggcagggacggcgccgtccagatcgtggatgaggtggtc
gagccaaccaatcttgcgaaggaaatggcggcgcggatcctgcagtcgccgagcgaggac
caggccgccgaaacccatcgtaccgccccgcgtagcgatgaccggccggtgcccccgcag
gcgaagggagcgggcggcggcaaggaggacggcgcgcgcggcagggacgcccagcaggag
accggccagcggcccgccgacgaccggcgcggaccgtcaccgcaggcgccgcaagtcgag
gatcagaccctcatcgaactgcgtcagggcttcgccgcgggccgtgaccaggacgatctc
gacatggggatctga
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