KEGG   Sphingomonas sp. FARSPH: DM480_11240
Entry
DM480_11240       CDS       T05685                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sphf  Sphingomonas sp. FARSPH
Pathway
sphf00010  Glycolysis / Gluconeogenesis
sphf00020  Citrate cycle (TCA cycle)
sphf00260  Glycine, serine and threonine metabolism
sphf00280  Valine, leucine and isoleucine degradation
sphf00310  Lysine degradation
sphf00380  Tryptophan metabolism
sphf00620  Pyruvate metabolism
sphf00630  Glyoxylate and dicarboxylate metabolism
sphf00640  Propanoate metabolism
sphf00785  Lipoic acid metabolism
sphf01100  Metabolic pathways
sphf01110  Biosynthesis of secondary metabolites
sphf01120  Microbial metabolism in diverse environments
sphf01200  Carbon metabolism
sphf01210  2-Oxocarboxylic acid metabolism
sphf01240  Biosynthesis of cofactors
Module
sphf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sphf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sphf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DM480_11240 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DM480_11240 (lpdA)
   00620 Pyruvate metabolism
    DM480_11240 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DM480_11240 (lpdA)
   00640 Propanoate metabolism
    DM480_11240 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DM480_11240 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DM480_11240 (lpdA)
   00310 Lysine degradation
    DM480_11240 (lpdA)
   00380 Tryptophan metabolism
    DM480_11240 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DM480_11240 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphf04147]
    DM480_11240 (lpdA)
Enzymes [BR:sphf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DM480_11240 (lpdA)
Exosome [BR:sphf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DM480_11240 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 NAD_binding_8 GIDA AlaDh_PNT_C HI0933_like Lys_Orn_oxgnase FAD_binding_3 Thi4 Amino_oxidase DAO 3HCDH_N
Other DBs
NCBI-ProteinID: AXJ95992
UniProt: A0A345WQP0
LinkDB
Position
2349421..2350821
AA seq 466 aa
MADEQQYDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKAMLH
ASEYFDAAANGAMAKMGIKVTPELDLDAMHGQRRDAVKQLTGGIEFLFKKNKVEWLKGRA
SFTGKDSVEVAGRTVRARNIVIATGSSVTPLPGVTVDQKMVVDSTGALELAKVPQHLVVI
GGGVIGLELGSVWRRLGAKVTVVEFLDQILPGFDGDVRKEANKIFKKQGLEFKLSTKVTG
VAVDGDTATLTIEPAKGGEAQTIEADAVLVAIGRRPNIDGLNLEAAGVALNGRGQVEIDH
DFRTNVPGVWAIGDVAPGLMLAHKAEDEGIAVAENIAGQHGIVNHDVIPSVVYTMPEFAG
VGLTEEAAKERGEVKVGKFPMMANSRAKTNHEPDGFVKIIADAKTDRVLGVWAIASVAGT
MIAQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctgacgaacagcagtacgactatgacgtcctcgtgatcggcgccggccctggcggc
tatgtcgccgcgatccgcgcggcgcagctggggctgaagaccgcgtgcgcggagagccgc
gagacgctgggcggcacctgcctcaacgtcggctgcatcccgtcgaaggcgatgttgcac
gcgtccgaatatttcgacgccgcggccaatggcgcgatggcgaagatgggcatcaaggtg
acgcccgaactcgacctcgacgcgatgcacggccagcgccgtgatgcggtcaagcagctg
accggcggtatcgagttcctgttcaagaagaacaaggtcgaatggctgaagggccgcgcc
agcttcacgggcaaggacagtgtcgaggtcgccggccgcaccgtgcgcgcgcggaacatc
gtcatcgctacgggctccagtgtcacgccgctacccggcgtcaccgttgaccagaagatg
gtcgtcgattcgaccggcgcgctcgaactcgccaaggtgccgcagcatctcgtcgtcatc
ggcggcggcgtcatcggcctggaactcggcagcgtgtggcgccgcctgggtgcgaaggtg
accgtcgtcgaattcctcgaccagatcctgcccggcttcgacggcgacgtccgcaaggaa
gccaacaagatcttcaagaagcagggcctcgagttcaagctgtcgaccaaggtcaccggc
gtcgccgtcgacggcgacaccgcgacgctgacgatcgaacccgccaagggtggcgaggcg
cagacgatcgaggcggatgcggtgctggtcgcgatcggccgcaggccgaacatcgacggt
ctcaacctcgaggcggccggcgtcgcgctgaatgggcgcgggcaagtggagatcgaccac
gacttccgcaccaacgtccccggcgtctgggcaatcggcgacgtcgcgcccggcctgatg
ctcgcgcacaaggcggaggacgaaggcatcgcggttgcggagaacatcgcgggccagcac
ggcatcgtgaaccacgacgtcatcccctcggtcgtctacacgatgcccgaattcgccggc
gtcggcctgaccgaggaagcggcaaaggaacgcggcgaggtcaaggtcggcaagttcccg
atgatggcgaacagccgggccaagaccaaccacgagcccgacggcttcgtgaagatcatc
gcggatgccaagaccgaccgcgtgctcggcgtgtgggcgatcgcctcggtcgcgggtacg
atgatcgcacaggcggcgcaggcgatggaattcggcgcgacgagcgaggacatcgcctac
acctgccacgcgcatccgacgcattcggaggcgatcaaggaagccgcgatggcggtgacc
ggcaagccgatccacatctga

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